BS22556.complete Sequence
968 bp assembled on 2011-01-25
GenBank Submission: KX804436
> BS22556.complete
GAAGTTATCAGTCGACATGGCGAACACCCTGAGAACTCTCGACCCAAAGT
TGGCGGCTCTGGCCAAAAGTGAGTGCAACGAGGAGCAGGCGCAGCGAGCG
GAGATTATTGCCACCATTAAGACATGGATCACCAAGTCGCCGCACCTTAA
GGCGCCCACGGATGAGCAGCTTATCCTGGCCTTTCTGCGGCGTTGCCGTT
TCAGCCAGGAGGAGACCAAACGGCGATTCGACAACTACTACTCCCTGCGC
AGCGTGTTCCCGGAGGTTCTGGGATCCCGACAGGTGGACGAGGCCCTGCT
CACCCAGTTGCAACGCGGAATCCATGTGATACCCATGCGACCTGTGAGTC
CCGAGGGGCCAAGGGTTATCATCTCGCAGTTCCGAAACATCGATCCCAAG
AAATCGAATCCCCGCGAAGCCTTCAAACTGATCTTCATAATGTTGGAACT
ATTGGCTTTGGAGTGCGATAATGCCGCGATTTCCGGCTTGATCTGGGTTG
TGGATGCCAGAGATGTTACCATGGAGCAGATGATGCAGTACGATCCCTTC
CTGCTGAAGAAGGCATTTGCTCTGGTGGACCAATGCATACCACTGCGATT
TGTTGAGATTCATATGATCAATATGCGCAAGGAGGGACAAACCATATTCA
ATTTTGTAACGAAGTTTTTGCCCTCCAAACTGCCTTTCAAGTTCGTGGTC
CACAAAAAGTCGGAGGATCTGTACCAGCACCTGCCCAGAGATGTGATGAC
CATCGAGTATGGTGGCACCAATGGCTATCAGGCAGAGGCAGTGGATCATT
GGCGCCAGAAGCTGCTGGACAGCAAGGATTATCTGGCCAAGGATGCCCAG
TATGGTACTAATGAGAAACTGCGCGTCGGATTGGCCAGTGCCTGGGCCAA
TGGAGAACTGGACGGGATGAGCGGTTCCTTCCGCAAATTGGAGCTAGATT
AAAAGCTTTCTAGACCAT
BS22556.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:00:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10300-RA | 936 | CG10300-PA | 1..936 | 17..952 | 4680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:00:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10300-RA | 1484 | CG10300-RA | 32..967 | 17..952 | 4680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23712093..23712466 | 318..691 | 1870 | 100 | Plus |
| 3R | 32079331 | 3R | 23711558..23711859 | 17..318 | 1510 | 100 | Plus |
| 3R | 32079331 | 3R | 23712534..23712796 | 690..952 | 1315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:00:00 has no hits.
BS22556.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:49 Download gff for
BS22556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10300-RA | 30..963 | 17..950 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:38 Download gff for
BS22556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10300-RA | 32..965 | 17..950 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:23 Download gff for
BS22556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10300-RA | 32..965 | 17..950 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:23 Download gff for
BS22556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23711558..23711859 | 17..318 | 100 | -> | Plus |
| 3R | 23712094..23712466 | 319..691 | 100 | -> | Plus |
| 3R | 23712536..23712794 | 692..950 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:38 Download gff for
BS22556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19537280..19537581 | 17..318 | 100 | -> | Plus |
| arm_3R | 19537816..19538188 | 319..691 | 100 | -> | Plus |
| arm_3R | 19538258..19538516 | 692..950 | 100 | | Plus |
BS22556.pep Sequence
Translation from 16 to 951
> BS22556.pep
MANTLRTLDPKLAALAKSECNEEQAQRAEIIATIKTWITKSPHLKAPTDE
QLILAFLRRCRFSQEETKRRFDNYYSLRSVFPEVLGSRQVDEALLTQLQR
GIHVIPMRPVSPEGPRVIISQFRNIDPKKSNPREAFKLIFIMLELLALEC
DNAAISGLIWVVDARDVTMEQMMQYDPFLLKKAFALVDQCIPLRFVEIHM
INMRKEGQTIFNFVTKFLPSKLPFKFVVHKKSEDLYQHLPRDVMTIEYGG
TNGYQAEAVDHWRQKLLDSKDYLAKDAQYGTNEKLRVGLASAWANGELDG
MSGSFRKLELD*
BS22556.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10300-PA | 311 | CG10300-PA | 1..311 | 1..311 | 1606 | 100 | Plus |
| CG12926-PA | 313 | CG12926-PA | 6..313 | 2..311 | 546 | 36.8 | Plus |
| CG30339-PA | 308 | CG30339-PA | 1..308 | 1..311 | 510 | 34.9 | Plus |
| CG10301-PB | 306 | CG10301-PB | 3..306 | 6..311 | 496 | 35.3 | Plus |
| CG33966-PA | 310 | CG33966-PA | 4..310 | 5..311 | 485 | 35.3 | Plus |
