Clone BS22557 Report

Search the DGRC for BS22557

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:225
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG13339-RA
Protein status:BS22557.pep: gold
Sequenced Size:491

Clone Sequence Records

BS22557.complete Sequence

491 bp assembled on 2011-01-25

GenBank Submission: KX806407

> BS22557.complete
GAAGTTATCAGTCGACATGGCAGAAACCACTGGTGTGCAAATAAAACTGG
AACAGCAAAACATCAAGGAGCGCCTGAATCTGCACGTCAAGCGGCGCCTG
CAGCAGGATGCGGATAATCCCGCCGAGAGTCCCGAATTGCTGCCCACCGA
TGCGAATGCCAAGCGCAGCAAGACGAAAGATGTCTCAAAACCAAGAAAAC
CCTACCAAAAACGGACAGAAAAACCGAAAACAGAGGCGACCAAGTGCAAG
AAAGTTGGACAATTGGGCAGTCCGGCGGGTGAAGTGGATCCAATGGATGA
CCAGGAGACGGAAGGCTTTTCCCCGGAGGCGCCGGATGGCAAATCCGCCA
GACGGGATTGCTGCAAAAATGCCGACATCCTCAACATAGTTTTGAACGCT
AAGAAACGTAGTTTAATGCAGGATCCTGAAGTTCAGGCCTTCTGGACCGA
AATAACCAATTGCATAAAGGGCTGAAAGCTTTCTAGACCAT

BS22557.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:00:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13339-RA 459 CG13339-PA 1..459 17..475 2295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG13339-RA 662 CG13339-RA 61..527 15..481 2335 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:00:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13824918..13825157 15..254 1200 100 Plus
2R 25286936 2R 13825209..13825437 253..481 1145 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:00:16 has no hits.

BS22557.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:50 Download gff for BS22557.complete
Subject Subject Range Query Range Percent Splice Strand
CG13339-RA 29..486 17..474 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:42 Download gff for BS22557.complete
Subject Subject Range Query Range Percent Splice Strand
CG13339-RA 63..520 17..474 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:28 Download gff for BS22557.complete
Subject Subject Range Query Range Percent Splice Strand
CG13339-RA 63..520 17..474 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:28 Download gff for BS22557.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13824920..13825157 17..254 100 -> Plus
2R 13825211..13825430 255..474 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:42 Download gff for BS22557.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9712425..9712662 17..254 100 -> Plus
arm_2R 9712716..9712935 255..474 100   Plus

BS22557.pep Sequence

Translation from 16 to 474

> BS22557.pep
MAETTGVQIKLEQQNIKERLNLHVKRRLQQDADNPAESPELLPTDANAKR
SKTKDVSKPRKPYQKRTEKPKTEATKCKKVGQLGSPAGEVDPMDDQETEG
FSPEAPDGKSARRDCCKNADILNIVLNAKKRSLMQDPEVQAFWTEITNCI
KG*

BS22557.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13339-PA 152 CG13339-PA 1..152 1..152 795 100 Plus