BS22565.complete Sequence
320 bp assembled on 2011-01-25
GenBank Submission: KX806156
> BS22565.complete
GAAGTTATCAGTCGACATGAGTTCCAAGTCCCTTTTCGACAGCGAGGAGG
ATGCCGCTCAGGCCAACAAATTATCCAGGAAAGCAAAGGAATCGCCCTTC
ATGCTTGTGGGTATTACCGGATTCGTGGCCGCCGGATTGATTGGAGCGTA
CAAGTACCGGAACCGCGGAACGATGAGCACCAGCGTCTTCCTGATGCAGC
TGCGAGTCGCCGCCCAGGGAACCGTCGTCGGATGTCTGACCCTCGGACTG
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAAAA
GTAAAAGCTTTCTAGACCAT
BS22565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:03:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17734-RB | 288 | CG17734-PB | 1..288 | 17..304 | 1440 | 100 | Plus |
| CG17734-RA | 306 | CG17734-PA | 1..284 | 17..300 | 1420 | 100 | Plus |
| CG11825-RC | 411 | CG11825-PC | 109..379 | 17..287 | 695 | 83.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17734-RB | 1024 | CG17734-RB | 125..412 | 17..304 | 1440 | 100 | Plus |
| CG17734-RA | 764 | CG17734-RA | 125..408 | 17..300 | 1420 | 100 | Plus |
| CG17734-RC | 1317 | CG17734-RC | 511..705 | 110..304 | 975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:03:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11242820..11243014 | 304..110 | 975 | 100 | Minus |
| 2R | 25286936 | 2R | 10420733..10421003 | 287..17 | 695 | 83.8 | Minus |
| 3R | 32079331 | 3R | 11243780..11243875 | 112..17 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:03:37 has no hits.
BS22565.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:55 Download gff for
BS22565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17734-RB | 104..383 | 17..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:30 Download gff for
BS22565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17734-RB | 125..404 | 17..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:38 Download gff for
BS22565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17734-RB | 125..404 | 17..296 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:38 Download gff for
BS22565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11242828..11243013 | 111..296 | 100 | <- | Minus |
| 3R | 11243782..11243875 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:30 Download gff for
BS22565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7068550..7068735 | 111..296 | 100 | <- | Minus |
| arm_3R | 7069504..7069597 | 17..110 | 100 | | Minus |
BS22565.pep Sequence
Translation from 16 to 303
> BS22565.pep
MSSKSLFDSEEDAAQANKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNR
GTMSTSVFLMQLRVAAQGTVVGCLTLGLAYSMAKEYLFDKAPKEK*
BS22565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17734-PB | 95 | CG17734-PB | 1..95 | 1..95 | 470 | 100 | Plus |
| CG17734-PA | 101 | CG17734-PA | 1..94 | 1..94 | 465 | 100 | Plus |
| CG11825-PA | 100 | CG11825-PA | 1..93 | 1..93 | 398 | 84.9 | Plus |
| CG11825-PC | 136 | CG11825-PC | 37..129 | 1..93 | 398 | 84.9 | Plus |
| CG11825-PD | 72 | CG11825-PD | 1..65 | 29..93 | 286 | 87.7 | Plus |
