BS22570.complete Sequence
491 bp assembled on 2011-01-25
GenBank Submission: KX801934
> BS22570.complete
GAAGTTATCAGTCGACATGCTCGAGAACTGTCAGCGTCACCACATGCTCC
TTGGACTAGGAGCCCTAACGATGGTCACCATACTCGTCCTGTTCGTGGAA
TCTCGTTACGCGGCAGATGGTCCTCGTCGCCGAGAGCCGCAATTCGTGAT
CGAGGACAACTCGACCTGCTGGCGGAATGAGAAGTACACGATGGTGCAGG
AGTGCCACCCGTGCTCCGAATTCGATATAGTCAGCCGGAGCTTGGGCGTC
TGCATTCACACGCACTACAAGGAGGTGCTGCGCTGCCAGAGCGGCGAGAT
CGTAACCAGGAGCTGCGACCGGGTGGCGCTCATCGAGCAAATGAACTTCT
TGAAATTTGAGGTCTCGTGCTTTGTAATCGGATTACTTAGCTACCTGGTC
AGTTATGCCCGCGATCGAGTCCTGTCCAGGCGCAACTACATGAGAATCGA
GCGACAGCTAAACCGGGTCCAATAGAAGCTTTCTAGACCAT
BS22570.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:00:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| JTBR-RC | 459 | CG1935-PC | 1..459 | 17..475 | 2295 | 100 | Plus |
| JTBR-RB | 459 | CG1935-PB | 1..459 | 17..475 | 2295 | 100 | Plus |
| JTBR-RA | 459 | CG1935-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| JTBR-RC | 799 | CG1935-RC | 114..572 | 17..475 | 2295 | 100 | Plus |
| JTBR-RB | 789 | CG1935-RB | 104..562 | 17..475 | 2295 | 100 | Plus |
| JTBR-RA | 849 | CG1935-RA | 164..622 | 17..475 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:00:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1802235..1802693 | 475..17 | 2295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:00:31 has no hits.
BS22570.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:50 Download gff for
BS22570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| JTBR-RA | 143..601 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:47 Download gff for
BS22570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| JTBR-RA | 164..622 | 17..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:33 Download gff for
BS22570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| JTBR-RA | 164..622 | 17..475 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:33 Download gff for
BS22570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1802235..1802693 | 17..475 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:47 Download gff for
BS22570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1802235..1802693 | 17..475 | 100 | | Minus |
BS22570.pep Sequence
Translation from 16 to 474
> BS22570.pep
MLENCQRHHMLLGLGALTMVTILVLFVESRYAADGPRRREPQFVIEDNST
CWRNEKYTMVQECHPCSEFDIVSRSLGVCIHTHYKEVLRCQSGEIVTRSC
DRVALIEQMNFLKFEVSCFVIGLLSYLVSYARDRVLSRRNYMRIERQLNR
VQ*
BS22570.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| JTBR-PC | 152 | CG1935-PC | 1..152 | 1..152 | 799 | 100 | Plus |
| JTBR-PB | 152 | CG1935-PB | 1..152 | 1..152 | 799 | 100 | Plus |
| JTBR-PA | 152 | CG1935-PA | 1..152 | 1..152 | 799 | 100 | Plus |
