BS22571.complete Sequence
1274 bp assembled on 2011-01-25
GenBank Submission: KX804391
> BS22571.complete
GAAGTTATCAGTCGACATGACGGCAGCCGGCTTTAATTCTATCCTCTGCC
TGAGGCAGTTAGTCCGTCTAAACAGGCGCCAGTATTCAGCCCCTGCGAAA
TCCGTGCTTTCCGGCTCACAAACAAATGACCAGGCAACGCCACCACCGAC
ATCGAAATCCGCGGACAAAATGCGCGGATGGCAGCTGCACAACTACGGCG
ATATTGACGAGCTGCAGCTCTCTGAAATGCTAAAGATACCCCAGATCCGT
TGTTCCAACGAGTGCCTGGTACGCATCAGGGCGACGGCAGTGAACCCCAT
CGACCTGGCCATGCTCCGTGGTTACGGGGCCACAGTGCTGAACAAGATGC
GCTGTCAGCCGGGCGACGGCATCGAGTTTCCGCTTATTTTGGGCCGCGAG
TTCTGCGGTGAGCTGGTGCAGACGGGAATGGGTGTTTCGCTGCCTCTGGG
ATCGCGAGTCTGGGGAGTGGTACCCCTACAGGCCACCATTGGCTCGCATG
CGGAGTATGTAGCCGTTCCTTCATACTGTCTTGCTCCTGCACCCAAAGAA
CTGGATGATTACGAGGCCGCCAGCGTGTTGTATGCCGGATTGACGGCTTG
GTCGGGACTGTACATAACTGGAGGCCTGGGTGGTCCATGTGGAGCCACAA
CAGCTTCCGGTGGAGGTGCCCACAAGCGGGTCCTAGTCCTTGGCGGCTCC
GGTGGCGTTGGCACATTGGCCATACAAATCCTCAAGTCCCAGAAAGTACA
AGTTTTGGCAACCTGCAGCGAAAATGCCATTGAAATGGTTCGCAATTTGG
GAGCCGATTTAGTGGTCGACTATAACAACCCGCAGGCCATGGAGGAGCTG
TGCAAATACGCACCCTATGACATTGTGCTGGACTGCGCTGGACAAGGTGG
TCAGAAGGCGGCGGAATCGAAGTACGACTTTCGCCAGTACATCACCTTCT
CATCTCCGTTGCTGGCCAACATCGACAAGCAGGGACTGGGAGTAGGAGCG
CTTAAGAATGTGTTCGATCTGTTCCAGACCAACGTAAGATCCGTCACGCA
GCGCGGAGGCCTTGTCAAATGGGGTTTCTTTAGTCCCGCCCCCCAGGGAA
TTCAATTTCTACAGAAACTAGTGGAGCAGCGAAAGCTGATGCCGCTGATC
GATAGCAGCTACGGTTTCAGTGAGCTGCCAAAGGCCTTTGAGAAGATGAA
ATCCGGGCACCTCCGGGGCAAAATTGTGGTGAAGCTGCGAGAGGAAACTG
GCGACTAAAAGCTTTCTAGACCAT
BS22571.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:00:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17221-RC | 1242 | CG17221-PC | 1..1242 | 17..1258 | 6210 | 100 | Plus |
| CG17221-RA | 1242 | CG17221-PA | 1..1242 | 17..1258 | 6210 | 100 | Plus |
| CG17221-RB | 1089 | CG17221-PB | 1..1089 | 170..1258 | 5445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:01:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17221-RC | 1673 | CG17221-RC | 117..1358 | 17..1258 | 6210 | 100 | Plus |
| CG17221-RA | 1409 | CG17221-RA | 117..1358 | 17..1258 | 6210 | 100 | Plus |
| CG17221-RB | 1319 | CG17221-RB | 37..1268 | 27..1258 | 6160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:00:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3040792..3041397 | 530..1135 | 3030 | 100 | Plus |
| 2L | 23513712 | 2L | 3040228..3040740 | 17..529 | 2565 | 100 | Plus |
| 2L | 23513712 | 2L | 3041451..3041575 | 1134..1258 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:00:57 has no hits.
BS22571.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:51 Download gff for
BS22571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17221-RA | 117..1356 | 17..1256 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:53 Download gff for
BS22571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17221-RA | 117..1356 | 17..1256 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:45 Download gff for
BS22571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17221-RA | 117..1356 | 17..1256 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:45 Download gff for
BS22571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3041453..3041573 | 1136..1256 | 100 | | Plus |
| 2L | 3040228..3040740 | 17..529 | 100 | -> | Plus |
| 2L | 3040792..3041397 | 530..1135 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:53 Download gff for
BS22571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3040228..3040740 | 17..529 | 100 | -> | Plus |
| arm_2L | 3040792..3041397 | 530..1135 | 100 | -> | Plus |
| arm_2L | 3041453..3041573 | 1136..1256 | 100 | | Plus |
BS22571.pep Sequence
Translation from 16 to 1257
> BS22571.pep
MTAAGFNSILCLRQLVRLNRRQYSAPAKSVLSGSQTNDQATPPPTSKSAD
KMRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIRATAVNPIDLAML
RGYGATVLNKMRCQPGDGIEFPLILGREFCGELVQTGMGVSLPLGSRVWG
VVPLQATIGSHAEYVAVPSYCLAPAPKELDDYEAASVLYAGLTAWSGLYI
TGGLGGPCGATTASGGGAHKRVLVLGGSGGVGTLAIQILKSQKVQVLATC
SENAIEMVRNLGADLVVDYNNPQAMEELCKYAPYDIVLDCAGQGGQKAAE
SKYDFRQYITFSSPLLANIDKQGLGVGALKNVFDLFQTNVRSVTQRGGLV
KWGFFSPAPQGIQFLQKLVEQRKLMPLIDSSYGFSELPKAFEKMKSGHLR
GKIVVKLREETGD*
BS22571.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17221-PC | 413 | CG17221-PC | 1..413 | 1..413 | 2140 | 100 | Plus |
| CG17221-PA | 413 | CG17221-PA | 1..413 | 1..413 | 2140 | 100 | Plus |
| CG17221-PB | 362 | CG17221-PB | 1..362 | 52..413 | 1884 | 100 | Plus |
