BS22581.complete Sequence
3272 bp assembled on 2011-02-18
GenBank Submission: KX805103
> BS22581.complete
GAAGTTATCAGTCGACATGGAGGCAGCTATTCTGGATATAATCAACGGGA
TCCTGGCCATAGACACGGAACGAATCCGTGAGTCCACAGCCAAGATGCTA
AAGGCCTACGAGAATCCCGATTCTCTGCTGGTTCTCACCCAGATCGTGAT
GTCGGACAGGCCGGTCCAAGAGCGGCAGGTCGCCGCCGTGCTCCTCAAGA
GGCGGGTCAAAAAGTTACGCCACTGGCAGTTGGTTCCCGCCGAGCACCAG
GCAGCAATCAAATCGAACATGCTACAGGTCCTCATCGCGGTGAAGGAAAA
GACCGTGAAGGGCACGGTGGCCTTTATAATTGGATCGCTGGTGCGCCACG
AGGAGGACAAGCAAAACTCCTGGAGGGAGGAAATACTGAAGTTTATTTAC
GAACGTTGCAGCAGCCCCGATCCAATAGAAAGCGAGCGGGGCAGCTCAAT
CTTTTCCTCGCTCATGGACGCTGCTCCCGATCAGTTTTCGAACCACACGG
ATACTATCTTCCCGTTGCTTGCCGGCATTCTAGTTACCGCCGAGGCGAAT
GGGAACATGGCCACACCCACCGTGCATAACATGTTGGCGGGTACGTGCGT
CCTGTTGCCTTTCATAAGTGGACATAGTGATGCTGAGCAGATTATGGTTA
AGGCTGTGCCGCTCATACTCAAGGCCCTGGCCGCCTTTGCCGAAAAGGGG
AACAGTAATGAGTTCATGGGTGCCTTTGATATCATCGACAGCATGGCCGA
GTATGTGCCCCACTTGCTGACCGGCAATGTGAAGCTGCTTCTGGAGTTTT
GTCTGATGATTGCGAGAAACAAGCAGTTCGACGCTTCGATTCGGGTTCAG
GTGCTTACCTTTGTGGGCAGCCTAGTTCGCCTCAAGAAGAAAATTATTAT
GAAGCAGAAACTACTACAGCCCACACTATCTGTTCTTTTCGAAGTGATTT
GCCAGGACGACCTCAAGGAAGACGATGATTACTTTTCCTCGGAGAGCCTA
AATAGTCCATCCAATGCAGCTGCGCAGACACTCGACCTGATGGCCCTTCA
CATGGTGCCGGACAAGTTTATTCCGCCACTACTGGATTTGCTGGAGCCTG
CGTTGCAGAGCCCGGAACCTGTGCTTCGCCGTTCCTCTTTTATTTGCATG
GGCGTTATTGCCGAGGGCTGTTCCGAGGCCATTGGGAAAAAGTATCTCGA
GGTCATGCTAAATATCATCAAAGCTGGAGTGTTGGACTCTGTTATGTTCG
TGCGGACCGCCGCATTCTTCGCCCTCGGTCAGTTTTCCGAGTTTCTTCAG
CCGACGATCTGCAAGTTTGCTCCCCAAATTCTACCCGTGTTGTTCGACTA
TCTAAACCAGCTGGTACTGGAACTCAAGGTTGGTGAGCCGGATTCGAAAC
ATATGGATCGTATGTTTTATGCCCTGGAGACCTTTTGCGAGAATCTGGAT
GAGGATATTGTTCCTTATTTACCCACACTTATGGATCGTCTGTTTGGGGT
TATGGAACCGCAGAACTCAAATCAAATGCGTGAAATGGCTTTGTCGGCCA
TAGCAGCGGTGTCAGCAGCAGCTAAGGAAAACCTGATGCCATATTTCCCC
AGGATCATGACCGTACTACAGGGCTGTCTGGTGAAGGATTGCCCAAAAGA
AATGTACAGTCAGCGCATCCAAGCTATCGACACTCTGGCCGCGCTGTGTC
GCGAATTGGGCAAGGATAATATTATTCCTCTTGCCGACGAAACAATGAAC
TTCTGCCTGATGATGCTGGAAGATGGTCCGGATGATCCCGAGTTCCGCAG
GAGTATATACAACCTGATGTCCTCTCTGTCATCAGTTGTCAACGAGAGCA
TGGCCAGTGTGTTCCCCAAGTTCATTGATCGCATAATGGAGTCTGTGATT
TCTTCGGAGGACATGGTGCCAAATGTGTCGGACAATGCGGAGGATGATTT
GGCCCTAGTAGATGCCCCCGACATAGAGATTGATTTAGAGCACACAGACG
ACGAAGATGACCAAGACGCTTACCTGGGGGAGAATGATTATATCGTCGAA
AAGGAGGAGGCCATTCTGTCACTCAAGGAGTTTGCTACCCATACCGGCGC
CGCCTTCGCGCCCTATTTGCAATCTGCATTCGAGAACGTCTACAAGATGA
TTGATCATCCGCAAGGCGACGTTCGTATGGCATGTATTGACTCCATTTGC
TCGTTCATTACGGCTCTCCACAAGTTGGATGATGCCGCCGGCCTGAAGCG
CGCCTGCGAGATTGCCATTCCAAAGTTTGCACATATAATGCGCACCGACG
ACCAGGTTGCGGTCGTACTCCGCATGCTTGACGTCCTCTACGATGTCTTC
AAGTACGTGCCGGCGATAAACAGCCAGGAGCACGCCGAACTTATATTCGG
TTGCATCAGGGACATCTTCACAAATAAAATGGCCTGTCAGTTTAACGAGG
AGAGCGGCGGCGGAGATGATGAGTGTTCGGAGGAAAGCGAGAACGACGAG
ATGCTGTTCGAGAACGCTGCCAATCTGTTCCCCATGTTTGGCTTAACCCT
TCAGCCGGAGCTGTTCTCGCTTTATTTTGGACGCCTTTACCATTTCTATA
TTCAAAGGCTGGCGAAGGTAAAGGAGCGCGATTTACCAGAACAGCGGGCA
TACATCTATGGCGCACTTGCTGACTGCTGCAAGGCGTTAAAAGGTTGCTG
TGCTACTTATTTCGATGCCCTACGTCCCATTTTTATCGCCGGTTCCAGGG
ATTCTGATGCCAAAGCGCGACAGAACTCCTATTTTGCACTAGGCGAAATT
GTCTTCCATTCCGAGGAAAAATCATTCGAGTCTTATCCGACAATTTTGCA
AGCCCTTTCCGAAGCAATTGTCAGGGAATCCGTTCCTGCCGCCATGGACA
ACATTTGCGGAGCAGTTGCTCGTCTCATAGTTACCAACCCAGATTCAGTG
CCGCTTGGCCAGGTGCTGCCCGTGTGGCTCAACCATTTGCCACTGAAGGA
TGACACCGTGGAGAACGATGTGATTCAGAAGGCGTTCCGTGTGCTATACT
TGAAGGCCCGCCCCAGCATTGAGGCACATCTTGAGCAAATCCTGGCCATC
ACCATAGAGGCGAGTTACAAGAAACAGATGCCTGACGTCGAGACAACCGA
GAGCGCGGTGGCCCTCATCAAAGAGATTCGCGCCAACTACCCGGAACTGT
TCAGCAAAGTATCGAACATGAATCCAGAAGTGTTCAATTATGTGCAAGCC
CTGTAAAAGCTTTCTAGACCAT
BS22581.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:40:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32164-RA | 3240 | CG32164-PA | 1..3240 | 17..3256 | 16200 | 100 | Plus |
| CG32164-RB | 3243 | CG32164-PB | 1..3243 | 17..3256 | 16135 | 99.9 | Plus |
| CG32165-RA | 3243 | CG32165-PA | 1..3243 | 17..3256 | 15610 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:40:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32164-RA | 3691 | CG32164-RA | 160..3399 | 17..3256 | 16200 | 100 | Plus |
| CG32164-RB | 3694 | CG32164-RB | 160..3402 | 17..3256 | 16135 | 99.9 | Plus |
| CG32165-RA | 3649 | CG32165-RA | 115..3357 | 17..3256 | 15610 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:40:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16605882..16607006 | 1488..2612 | 5625 | 100 | Plus |
| 3L | 28110227 | 3L | 16598195..16599319 | 1488..2612 | 5505 | 99.3 | Plus |
| 3L | 28110227 | 3L | 16604006..16604721 | 256..971 | 3580 | 100 | Plus |
| 3L | 28110227 | 3L | 16596319..16597034 | 256..971 | 3250 | 96.9 | Plus |
| 3L | 28110227 | 3L | 16607428..16607854 | 2830..3256 | 2135 | 100 | Plus |
| 3L | 28110227 | 3L | 16599741..16600167 | 2830..3256 | 2120 | 99.8 | Plus |
| 3L | 28110227 | 3L | 16604779..16605193 | 970..1384 | 2060 | 99.8 | Plus |
| 3L | 28110227 | 3L | 16597092..16597506 | 970..1384 | 2015 | 99 | Plus |
| 3L | 28110227 | 3L | 16599443..16599663 | 2611..2831 | 1105 | 100 | Plus |
| 3L | 28110227 | 3L | 16607130..16607350 | 2611..2831 | 1105 | 100 | Plus |
| 3L | 28110227 | 3L | 16596085..16596259 | 81..255 | 875 | 100 | Plus |
| 3L | 28110227 | 3L | 16603772..16603946 | 81..255 | 875 | 100 | Plus |
| 3L | 28110227 | 3L | 16598025..16598136 | 1377..1488 | 560 | 100 | Plus |
| 3L | 28110227 | 3L | 16605712..16605823 | 1377..1488 | 560 | 100 | Plus |
| 3L | 28110227 | 3L | 16603212..16603277 | 17..82 | 330 | 100 | Plus |
| 3L | 28110227 | 3L | 16595534..16595599 | 17..82 | 315 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:40:42 has no hits.
BS22581.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:39:52 Download gff for
BS22581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32164-RA | 126..3363 | 17..3254 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:12:53 Download gff for
BS22581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32164-RA | 160..3397 | 17..3254 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:24:34 Download gff for
BS22581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32164-RA | 160..3397 | 17..3254 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:24:34 Download gff for
BS22581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16607131..16607348 | 2612..2829 | 100 | -> | Plus |
| 3L | 16603212..16603277 | 17..82 | 100 | -> | Plus |
| 3L | 16603774..16603946 | 83..255 | 100 | -> | Plus |
| 3L | 16604006..16604721 | 256..971 | 100 | -> | Plus |
| 3L | 16604781..16605187 | 972..1378 | 100 | -> | Plus |
| 3L | 16605714..16605823 | 1379..1488 | 100 | -> | Plus |
| 3L | 16605883..16607005 | 1489..2611 | 100 | -> | Plus |
| 3L | 16607428..16607852 | 2830..3254 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:12:53 Download gff for
BS22581.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16596312..16596377 | 17..82 | 100 | -> | Plus |
| arm_3L | 16596874..16597046 | 83..255 | 100 | -> | Plus |
| arm_3L | 16597106..16597821 | 256..971 | 100 | -> | Plus |
| arm_3L | 16597881..16598287 | 972..1378 | 100 | -> | Plus |
| arm_3L | 16598814..16598923 | 1379..1488 | 100 | -> | Plus |
| arm_3L | 16598983..16600105 | 1489..2611 | 100 | -> | Plus |
| arm_3L | 16600231..16600448 | 2612..2829 | 100 | -> | Plus |
| arm_3L | 16600528..16600952 | 2830..3254 | 100 | | Plus |
BS22581.pep Sequence
Translation from 16 to 3255
> BS22581.pep
MEAAILDIINGILAIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDRPV
QERQVAAVLLKRRVKKLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGT
VAFIIGSLVRHEEDKQNSWREEILKFIYERCSSPDPIESERGSSIFSSLM
DAAPDQFSNHTDTIFPLLAGILVTAEANGNMATPTVHNMLAGTCVLLPFI
SGHSDAEQIMVKAVPLILKALAAFAEKGNSNEFMGAFDIIDSMAEYVPHL
LTGNVKLLLEFCLMIARNKQFDASIRVQVLTFVGSLVRLKKKIIMKQKLL
QPTLSVLFEVICQDDLKEDDDYFSSESLNSPSNAAAQTLDLMALHMVPDK
FIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLNI
IKAGVLDSVMFVRTAAFFALGQFSEFLQPTICKFAPQILPVLFDYLNQLV
LELKVGEPDSKHMDRMFYALETFCENLDEDIVPYLPTLMDRLFGVMEPQN
SNQMREMALSAIAAVSAAAKENLMPYFPRIMTVLQGCLVKDCPKEMYSQR
IQAIDTLAALCRELGKDNIIPLADETMNFCLMMLEDGPDDPEFRRSIYNL
MSSLSSVVNESMASVFPKFIDRIMESVISSEDMVPNVSDNAEDDLALVDA
PDIEIDLEHTDDEDDQDAYLGENDYIVEKEEAILSLKEFATHTGAAFAPY
LQSAFENVYKMIDHPQGDVRMACIDSICSFITALHKLDDAAGLKRACEIA
IPKFAHIMRTDDQVAVVLRMLDVLYDVFKYVPAINSQEHAELIFGCIRDI
FTNKMACQFNEESGGGDDECSEESENDEMLFENAANLFPMFGLTLQPELF
SLYFGRLYHFYIQRLAKVKERDLPEQRAYIYGALADCCKALKGCCATYFD
ALRPIFIAGSRDSDAKARQNSYFALGEIVFHSEEKSFESYPTILQALSEA
IVRESVPAAMDNICGAVARLIVTNPDSVPLGQVLPVWLNHLPLKDDTVEN
DVIQKAFRVLYLKARPSIEAHLEQILAITIEASYKKQMPDVETTESAVAL
IKEIRANYPELFSKVSNMNPEVFNYVQAL*
BS22581.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:25:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32164-PA | 1079 | CG32164-PA | 1..1079 | 1..1079 | 5492 | 100 | Plus |
| CG32164-PB | 1080 | CG32164-PB | 1..1080 | 1..1079 | 5480 | 99.9 | Plus |
| CG32165-PA | 1080 | CG32165-PA | 1..1080 | 1..1079 | 5365 | 97.7 | Plus |
| CG32165-PC | 1059 | CG32165-PC | 1..1059 | 1..1079 | 5260 | 96.2 | Plus |
| CG32165-PB | 1059 | CG32165-PB | 1..1059 | 1..1079 | 5260 | 96.2 | Plus |
