BS22589.complete Sequence
1010 bp assembled on 2011-01-25
GenBank Submission: KX801589
> BS22589.complete
GAAGTTATCAGTCGACATGGACAACGCAAGCTCAACTTTTGGCCAGTCGG
ACTTCGACTGGGACGCCATCAACGTGGGTGACTACCAGTTGGATCACTCC
CAGAACTTTTTCGCACGGGCCAACAAGGAGAACAACAGGAGCCTCAGCAA
TGTTAACCCCCTCCTGCTGTGCACCACTCCGCAGAAGATCGGCCGGGAAC
AGCGCGATGGTGACTTCGATGGCAAGCTGATTAGTGCTGGGGATCTCAAG
AAGGAGTCCCCCAAAGACACGACAGAGGCGTCCAAGGATGCACTCACTAT
CAAGCCCAAAGTTGAGCCCCACGATGTGCCAGAACTCAAGTTGAAAACAG
AGCTCCAGGAGCTGGCTCAAGTGTCCCCACTTGACAACGGCCCAGAGCCG
CAGGACGACATCAAACAAATTGTTCCGCTCAACTGGGGCAAGGATGGGGA
CGATGATGAGAAGCACATGACGGAGGCCGATCAGCACTTGGTCCACCAGG
AACGTCCTCCCGGCGTCGGGGCCAAGCTCCGCCTGGAGTGGTCACCCCCA
CGCCACCGCGAGCACGAGGGAGCCGGCGCCTCTGCCACATCCGCCGCCCC
CAAGGCATACCAGTTCAAGGACGTGTACGAGAGCAAGCGGCAGCAGGCGA
TGCGCAAGCGCTCCGAGGAGGAAAGCAAGGCGCGCCAGTTCCACAGCCGA
CCCATGCCCAACTTTAAGGCCATGCACAAGCGCATGAACGAGCTGGCAGT
CATCCACAAAATCACCGTCCCGCGCACGCCCGAGACGCTCAAGCACAGCC
AGTCGAACGTGGAGCGGCGTCGCGACGACGATCCGGCCGACCAGGCGCGA
CTGCATCCGGCTGGTACCCGCTCCAGACCCTTCCACCTGCGCAGCGAGCA
GCGCGTGCGCGACCGACGCGAGTTCGACGCCGCCGTGCAGGTCAGCCTGG
AGCAGAAGAAGAAGGAGGTAAAGACTAAATCTAGTAGCCCTTAAAAGCTT
TCTAGACCAT
BS22589.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:29:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mei-38-RA | 978 | CG14781-PA | 1..978 | 17..994 | 4890 | 100 | Plus |
| mei-38-RB | 981 | CG14781-PB | 1..981 | 17..994 | 4825 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:29:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mei-38-RA | 1333 | CG14781-RA | 129..1107 | 16..994 | 4895 | 100 | Plus |
| mei-38-RB | 1336 | CG14781-RB | 129..1110 | 16..994 | 4830 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:29:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1477375..1478256 | 113..994 | 4410 | 100 | Plus |
| X | 23542271 | X | 1477191..1477288 | 16..113 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:29:06 has no hits.
BS22589.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:28 Download gff for
BS22589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mei-38-RA | 99..1074 | 17..992 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:39 Download gff for
BS22589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mei-38-RA | 130..1105 | 17..992 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:01 Download gff for
BS22589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mei-38-RA | 130..1105 | 17..992 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:01 Download gff for
BS22589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1477192..1477288 | 17..113 | 100 | -> | Plus |
| X | 1477376..1478254 | 114..992 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:39 Download gff for
BS22589.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1371225..1371321 | 17..113 | 100 | -> | Plus |
| arm_X | 1371409..1372287 | 114..992 | 100 | | Plus |
BS22589.pep Sequence
Translation from 16 to 993
> BS22589.pep
MDNASSTFGQSDFDWDAINVGDYQLDHSQNFFARANKENNRSLSNVNPLL
LCTTPQKIGREQRDGDFDGKLISAGDLKKESPKDTTEASKDALTIKPKVE
PHDVPELKLKTELQELAQVSPLDNGPEPQDDIKQIVPLNWGKDGDDDEKH
MTEADQHLVHQERPPGVGAKLRLEWSPPRHREHEGAGASATSAAPKAYQF
KDVYESKRQQAMRKRSEEESKARQFHSRPMPNFKAMHKRMNELAVIHKIT
VPRTPETLKHSQSNVERRRDDDPADQARLHPAGTRSRPFHLRSEQRVRDR
REFDAAVQVSLEQKKKEVKTKSSSP*
BS22589.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mei-38-PA | 325 | CG14781-PA | 1..325 | 1..325 | 1707 | 100 | Plus |
| mei-38-PB | 326 | CG14781-PB | 1..326 | 1..325 | 1695 | 99.7 | Plus |
| CG15395-PB | 275 | CG15395-PB | 82..243 | 193..319 | 240 | 33.3 | Plus |
