Clone BS22594 Report

Search the DGRC for BS22594

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:225
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG16787-RA
Protein status:BS22594.pep: full length peptide match
Sequenced Size:794

Clone Sequence Records

BS22594.complete Sequence

794 bp assembled on 2011-01-25

GenBank Submission: KX802642

> BS22594.complete
GAAGTTATCAGTCGACATGTTGCGAAATTTCGGGATTTCATCAATAAGAA
GGAGCAGCTGGATGGCCAACTGGTGCTCCAAGGAGCGGGCGTGGGCGTCC
GCCATGCGGCTAAGTGCGTCTGCGCCGGCGAAGTGTCCACAAAAGTTGTT
AAACAGCCATGCCGCCAATAACCTCCAGCAAAGTCGAAGGGCCTACGAGA
GCACCAAAGCGGAGAGGCTGCCCGGGAACCCTAAGGAGAACGAGCGTAAG
CCCGAGGACCTGGATAGAGCCTACGAGGTTCTGAGGACCACGCTACCAAA
GCTGTTCGTGGAGCCCCTAGACTACTCCATTTACAGCCCGGGCCTAATCT
TCCACAACAACATAACGGGCAAGCACACGGTGGGCCTGTACCACTACGTC
AAACAGATCGCCATCCTGCGAACGGTTGGCCACCTGAAGTACGCCTACGT
GAAATTCGAGGTGCTCAAGATCACGAAGCACCAGGACGACTACACAGTGC
GGATAAGGTGGCGAGTGCGCGGCATTTCCGGCCTGAAGGTCATGTTCCAG
TTCTGGAAGTACAAGCTCTGGCAACTGAAGGAGGTGCTGAAGGATCAGGA
GGCCTGGTACGACGGCTACTCTGTCTGCTATCTGGGCGACGATGGGCTGA
TCGTCAAGCACGTCGTGGACAAAGTGATGCCGGACGAGAGTCGGGAGGCG
GTTGAGAACCCTTCTGCGACGGCACTACCTCCCGGATCCTTGGCAGCGAC
CTCTTCCCAGAAGATCAACTGCCAATGAAAGCTTTCTAGACCAT

BS22594.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:28:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG16787-RA 762 CG16787-PA 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:28:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG16787-RA 1071 CG16787-RA 224..986 17..779 3815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:28:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23956420..23957182 779..17 3815 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:28:46 has no hits.

BS22594.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:27 Download gff for BS22594.complete
Subject Subject Range Query Range Percent Splice Strand
CG16787-RA 227..982 22..777 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:32 Download gff for BS22594.complete
Subject Subject Range Query Range Percent Splice Strand
CG16787-RA 229..984 22..777 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:56 Download gff for BS22594.complete
Subject Subject Range Query Range Percent Splice Strand
CG16787-RA 229..984 22..777 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:56 Download gff for BS22594.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23956422..23957177 22..777 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:32 Download gff for BS22594.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19843945..19844700 22..777 100   Minus

BS22594.pep Sequence

Translation from 16 to 777

> BS22594.pep
MLRNFGISSIRRSSWMANWCSKERAWASAMRLSASAPAKCPQKLLNSHAA
NNLQQSRRAYESTKAERLPGNPKENERKPEDLDRAYEVLRTTLPKLFVEP
LDYSIYSPGLIFHNNITGKHTVGLYHYVKQIAILRTVGHLKYAYVKFEVL
KITKHQDDYTVRIRWRVRGISGLKVMFQFWKYKLWQLKEVLKDQEAWYDG
YSVCYLGDDGLIVKHVVDKVMPDESREAVENPSATALPPGSLAATSSQKI
NCQ*

BS22594.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG16787-PA 253 CG16787-PA 1..253 1..253 1341 100 Plus