BS22638.complete Sequence
719 bp assembled on 2012-04-25
GenBank Submission: KX801695
> BS22638.complete
GAAGTTATCAGTCGACATGTCCGCTCCCATTCGCTACTACTATGACCTGA
TGTCGCAGCCCTCGAGGGCGTTGTTCATTATCTTCCGGCTGAGCAACATG
CCCTTCGAAGACTGCGTGGTTGCCCTGCGCAATGGCGAGCACTTGACCGA
AGACTTCAAGAAGGAGATTAACCGCTTCCAGCGTGTGCCCTGCATCCACG
ACAATGGCTACAAGCTAGCGGAGAGCGTGGCCATCCTGCGCTATTTGAGC
GCCAAGGGCAAGATACCGGAGCACCTCTATCCCAAGTACTTCGTTGACCA
GAGCCGCGTCGACGAGTTCCTCGAATGGCAGCACATGTCCCTGCGGCTCA
CCTGCGCCATGTACTTCCGCACCGTGTGGCTGGAGCCGCTTCTGACAGGA
CGCACACCCTCCGAAGCCAAAATCGAGACGTTCCGCATGCAGATGGAGCG
CAACCTCGACGTAGTCGAGGAGGTCTGGCTGGAGGGCAAGGACTTCCTCA
CCGGATCCTCCCTCACCGTTGCGGACATCTTTGCAGCCTGTGAAATCGAA
CAGACACGAATGGCCGACTACGATGTCAGGATCAAGTACCCCAAGATCAG
GGCGTGGCTGAAGAGAGTGCGCCAGAGCTGCAATCCGTACTACGATGTGG
CCCACGAGTTCGTCTACAAAATCTCCGGAACGGGTCCACAGGCCAAGCTA
TAAAAGCTTTCTAGACCAT
BS22638.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:20:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT3-RB | 807 | CG1702-PB | 121..807 | 17..703 | 3435 | 100 | Plus |
| GstT3-RC | 687 | CG1702-PC | 1..687 | 17..703 | 3435 | 100 | Plus |
| GstT3-RA | 687 | CG1702-PA | 1..687 | 17..703 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT3-RB | 978 | CG1702-RB | 161..848 | 17..704 | 3440 | 100 | Plus |
| GstT3-RC | 1369 | CG1702-RC | 552..1239 | 17..704 | 3440 | 100 | Plus |
| GstT3-RA | 875 | CG1702-RA | 58..745 | 17..704 | 3440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:20:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20469035..20469459 | 134..558 | 2125 | 100 | Plus |
| X | 23542271 | X | 20469520..20469666 | 558..704 | 735 | 100 | Plus |
| X | 23542271 | X | 20468576..20468694 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:20:54 has no hits.
BS22638.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:56 Download gff for
BS22638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1702-RB | 121..805 | 17..701 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:58 Download gff for
BS22638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT3-RA | 58..742 | 17..701 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:20 Download gff for
BS22638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT3-RA | 58..742 | 17..701 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:20 Download gff for
BS22638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20468576..20468693 | 17..134 | 100 | -> | Plus |
| X | 20469036..20469458 | 135..557 | 100 | -> | Plus |
| X | 20469520..20469663 | 558..701 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:58 Download gff for
BS22638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20339603..20339720 | 17..134 | 100 | -> | Plus |
| arm_X | 20340063..20340485 | 135..557 | 100 | -> | Plus |
| arm_X | 20340547..20340690 | 558..701 | 100 | | Plus |
BS22638.pep Sequence
Translation from 16 to 702
> BS22638.pep
MSAPIRYYYDLMSQPSRALFIIFRLSNMPFEDCVVALRNGEHLTEDFKKE
INRFQRVPCIHDNGYKLAESVAILRYLSAKGKIPEHLYPKYFVDQSRVDE
FLEWQHMSLRLTCAMYFRTVWLEPLLTGRTPSEAKIETFRMQMERNLDVV
EEVWLEGKDFLTGSSLTVADIFAACEIEQTRMADYDVRIKYPKIRAWLKR
VRQSCNPYYDVAHEFVYKISGTGPQAKL*
BS22638.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT3-PC | 228 | CG1702-PC | 1..228 | 1..228 | 1208 | 100 | Plus |
| GstT3-PA | 228 | CG1702-PA | 1..228 | 1..228 | 1208 | 100 | Plus |
| GstT3-PB | 268 | CG1702-PB | 41..268 | 1..228 | 1208 | 100 | Plus |
| GstT1-PA | 228 | CG30000-PA | 1..227 | 1..227 | 593 | 51.1 | Plus |
| GstT2-PA | 228 | CG30005-PA | 1..228 | 1..228 | 532 | 47.8 | Plus |
