Clone BS22641 Report

Search the DGRC for BS22641

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:226
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG9117-RA
Protein status:BS22641.pep: full length peptide match
Sequenced Size:719

Clone Sequence Records

BS22641.complete Sequence

719 bp assembled on 2011-01-25

GenBank Submission: KX805698

> BS22641.complete
GAAGTTATCAGTCGACATGGCATACACTGATCCTGCGCAACGAAACCAGG
TGACCGTGCTCCAGGTCGGCTATTCTCGCCAAGAAGAAGGAGACGAGTCC
GCCATGCGGGCTAACTGCACATGCACACTGGTCCGCTGCCGGGATGGCAC
CAACATAATCGTGGACACACTGACGGCCTGGGATGGAGATCACCTGCGTT
CGTTGTTGGGCCAGCAGGGACTAGGCGTCGATGACATCCACGTGGTGGTC
TGCTCTCACGGACACTCTGACCACATCGGTTGCAACTATCTGTTTCAGAA
GGCACGAATGCATTTGGTCGGCGCATGTGCCTCACATCACGACCTCTACA
TGGACCACCTTGGTAGTGGTAATCCAGACGAGCAACTGGCCCTAGATTCG
AATGCCGAGGTGGTAGTGAGGCGGTCGCCAGGACACACCCTCAGCTGCGT
TTCAGTTCTTGTGGAAAATTCCCAGCTGGGTGGACGGGTCGGTATCACCG
GAGATCTCTTCGAGCGTCGCGAGGACATCGACGATGAGAACATTTGGATG
GACGCTGGAAGCGAAAACGAGAAGGTGCAGCGCGAGGAGCGCAGTAAAAT
GGCACAACTGTGCGAGTTTATAATCCCAGGACATGGTCCGATGTTTTCTG
TCACACAATCAATGCGCTGTAAACTTAAAGAAGACGCCACTTCTAACACT
TAAAAGCTTTCTAGACCAT

BS22641.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG9117-RA 687 CG9117-PA 1..687 17..703 3435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG9117-RA 906 CG9117-RA 88..774 17..703 3435 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6037129..6037815 703..17 3435 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:25:18 has no hits.

BS22641.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:14:57 Download gff for BS22641.complete
Subject Subject Range Query Range Percent Splice Strand
CG9117-RA 88..772 17..701 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:15 Download gff for BS22641.complete
Subject Subject Range Query Range Percent Splice Strand
CG9117-RA 88..772 17..701 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:57 Download gff for BS22641.complete
Subject Subject Range Query Range Percent Splice Strand
CG9117-RA 88..772 17..701 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:57 Download gff for BS22641.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6037131..6037815 17..701 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:15 Download gff for BS22641.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6037131..6037815 17..701 100   Minus

BS22641.pep Sequence

Translation from 16 to 702

> BS22641.pep
MAYTDPAQRNQVTVLQVGYSRQEEGDESAMRANCTCTLVRCRDGTNIIVD
TLTAWDGDHLRSLLGQQGLGVDDIHVVVCSHGHSDHIGCNYLFQKARMHL
VGACASHHDLYMDHLGSGNPDEQLALDSNAEVVVRRSPGHTLSCVSVLVE
NSQLGGRVGITGDLFERREDIDDENIWMDAGSENEKVQREERSKMAQLCE
FIIPGHGPMFSVTQSMRCKLKEDATSNT*

BS22641.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9117-PA 228 CG9117-PA 1..228 1..228 1215 100 Plus