BS22642.complete Sequence
1550 bp assembled on 2011-02-15
GenBank Submission: KX800224
> BS22642.complete
GAAGTTATCAGTCGACATGTCATTTGTGGAAATATGTCTCGTCCTGGCTA
CCATCGGCTTACTATTGTTCAAGTGGAGTACTGGCACCTTTAAGGCTTTC
GAAGGGCGAAACCTATACTTCGAGAAACCGTACCCATTTTTAGGTAACAT
GGCTGCATCGGCCTTGCAAAAAGCCTCATTCCAAAAACAAATCTCCGAGT
TCTATAATCGCACTCGACATCACAAACTGGTAGGGCTCTTTAATCTACGC
ACCCCAATGATCCAGATAAACGACCCCCAGCTGATTAAAAAGATATGCGT
TAAGGACTTTGACCACTTTCCCAACCACCAGACACTGAATATCCCTAACG
AGCGTCTAGTTAACGACATGCTCAATGTGATGAGGGATCAGCACTGGAGG
AACATGAGGAGCGTCCTGACCCCGGTCTTCACGTCGGCCAAGATGCGAAA
CATGTTCACCCTGATGAACGAGAGCTTCGCTCAATGCCTGGAGCACCTGA
AATCCTCCCAGCCTATTGCTGCAGGTGAAAATGCCTTTGAGCTGGACATG
AAAGTGCTTTGCAACAAGCTTTCCAACGACGTGATTGCAACAACAGCTTT
TGGACTAAAGGTTAACTCATTCGATGACCCAGAGAATGAGTTCCATACGA
TCGGGAAAACCCTAGCTTTCTCACGGGGTCTTCCGTTCCTAAAGTTCATG
ATGTGCTTACTTGCTCCGAAAGTTTTTAATTTTTTCAAGCTGACTATCTT
TGACTCCACCAATGTTGAGTACTTTGTACGCCTGGTGGTGGATGCTATGC
AGTACCGGGAGAAACACAATATCACCAGGCCCGACATGATCCAGCTTCTG
ATGGAGGCCAAGAAGGAGTCGAAGGACAACTGGACGGACGATGAGATCGT
GGCTCAGTGCTTCATTTTCTTCTTCGCCGCCTTCGAAAACAACTCCAATC
TGATCTGTACCACCGCCTACGAACTGCTTCGCAATCTCGACATCCAGGAG
CGCTTATATGAAGAGGTTAAGGAAACCCAAGAGGCACTAAAGGGTGCACC
CCTCACTTACGACGCCGCGCAGGAGATGACCTACATGGACATGGTCATCT
CCGAGTCCCTTCGAAAGTGGACCCTTTCGGCAGCAGCAGACCGGCTCTGC
GCCAAGGATTACACGCTCACAGATGATGAAGGCACCAAGCTTTTCGAGTT
TAAGGCAGGGGATAATATAAACATTCCCATCTGTGGGTTGCACTGGGATG
AGCGCTTCTTTCCGCAACCCCAGAGGTTTGACCCAGAGCGATTTAGCGAA
AGGCGTAAAAAAGATTTGATACCCTACACATATTTGCCATTTGGAGTCGG
ACCCCGCAGCTGCATTGGAAATCGCTATGCTGTGATGCAGGCCAAGGGTA
TGCTCTACAATCTAATGCTAAATTACAAGATTGAGGCGTCACCGAGAACC
ACCAGGGATATGTGGGAATCAGCACGAGGGTTCAATATAATTCCTACGAC
CGGATTCTGGATGCAGTTGGTGTCGCGTAAATAGAAGCTTTCTAGACCAT
BS22642.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp9b1-RA | 1518 | CG4485-PA | 1..1518 | 17..1534 | 7590 | 100 | Plus |
| Cyp9b2-RA | 1518 | CG4486-PA | 100..1517 | 116..1533 | 2785 | 79.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:58:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp9b1-RA | 1752 | CG4485-RA | 32..1549 | 17..1534 | 7590 | 100 | Plus |
| Cyp9b2-RA | 1667 | CG4486-RA | 150..1567 | 116..1533 | 2785 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:58:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7128303..7128940 | 1368..731 | 3190 | 100 | Minus |
| 2R | 25286936 | 2R | 7129003..7129510 | 730..223 | 2540 | 100 | Minus |
| 2R | 25286936 | 2R | 7130617..7131238 | 1353..732 | 1595 | 83.8 | Minus |
| 2R | 25286936 | 2R | 7129572..7129777 | 222..17 | 1030 | 100 | Minus |
| 2R | 25286936 | 2R | 7128041..7128208 | 1534..1367 | 840 | 100 | Minus |
| 2R | 25286936 | 2R | 7131338..7131819 | 704..223 | 745 | 77 | Minus |
| 2R | 25286936 | 2R | 7130377..7130543 | 1533..1367 | 355 | 80.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:58:26 has no hits.
BS22642.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:58 Download gff for
BS22642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b1-RA | 31..1542 | 17..1528 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:56 Download gff for
BS22642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b1-RA | 32..1543 | 17..1528 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:30 Download gff for
BS22642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp9b1-RA | 32..1543 | 17..1528 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:30 Download gff for
BS22642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7128047..7128207 | 1368..1528 | 100 | <- | Minus |
| 2R | 7128304..7128940 | 731..1367 | 100 | <- | Minus |
| 2R | 7129003..7129510 | 223..730 | 100 | <- | Minus |
| 2R | 7129572..7129777 | 17..222 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:56 Download gff for
BS22642.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3015552..3015712 | 1368..1528 | 100 | <- | Minus |
| arm_2R | 3015809..3016445 | 731..1367 | 100 | <- | Minus |
| arm_2R | 3016508..3017015 | 223..730 | 100 | <- | Minus |
| arm_2R | 3017077..3017282 | 17..222 | 100 | | Minus |
BS22642.pep Sequence
Translation from 16 to 1533
> BS22642.pep
MSFVEICLVLATIGLLLFKWSTGTFKAFEGRNLYFEKPYPFLGNMAASAL
QKASFQKQISEFYNRTRHHKLVGLFNLRTPMIQINDPQLIKKICVKDFDH
FPNHQTLNIPNERLVNDMLNVMRDQHWRNMRSVLTPVFTSAKMRNMFTLM
NESFAQCLEHLKSSQPIAAGENAFELDMKVLCNKLSNDVIATTAFGLKVN
SFDDPENEFHTIGKTLAFSRGLPFLKFMMCLLAPKVFNFFKLTIFDSTNV
EYFVRLVVDAMQYREKHNITRPDMIQLLMEAKKESKDNWTDDEIVAQCFI
FFFAAFENNSNLICTTAYELLRNLDIQERLYEEVKETQEALKGAPLTYDA
AQEMTYMDMVISESLRKWTLSAAADRLCAKDYTLTDDEGTKLFEFKAGDN
INIPICGLHWDERFFPQPQRFDPERFSERRKKDLIPYTYLPFGVGPRSCI
GNRYAVMQAKGMLYNLMLNYKIEASPRTTRDMWESARGFNIIPTTGFWMQ
LVSRK*
BS22642.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:12:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp9b1-PA | 505 | CG4485-PA | 1..505 | 1..505 | 2668 | 100 | Plus |
| Cyp9b2-PA | 505 | CG4486-PA | 1..505 | 1..505 | 2096 | 74.7 | Plus |
| Cyp9f2-PA | 516 | CG11466-PA | 4..515 | 5..504 | 1100 | 42.6 | Plus |
| Cyp9c1-PA | 522 | CG3616-PA | 1..519 | 1..504 | 1054 | 40.7 | Plus |
| Cyp9h1-PA | 518 | CG17577-PA | 4..518 | 2..505 | 1003 | 39.1 | Plus |
