BS22660.complete Sequence
368 bp assembled on 2011-01-25
GenBank Submission: KX804026
> BS22660.complete
GAAGTTATCAGTCGACATGGCCAAACATCATCCGGATTTGATTTTCTGCC
GCAAGCAGCCCGGCGTGGCCATTGGACGCCTGTGTGAAAAAGACGATGGA
AAGTGTGTGATCTGCGACTCCTACGTGCGGCCATGCACACTGGTGCGGAT
CTGCGACGAGTGCAACTACGGATCCTACCAGGGCAGGTGCGTCATCTGTG
GAGGACCCGGAGTGTCGGATGCCTACTACTGCAAGTCCTGCACCATTCAG
GAAAAGGACCGCGACGGATGCCCCAAGATTGTAAATCTAGGCAGCTCCAA
GACTGACCTGTTCTACGAACGCAAGAAATATGGCTTCAAACAGAACTATT
AAAAGCTTTCTAGACCAT
BS22660.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9548-RA | 336 | CG9548-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9548-RA | 483 | CG9548-RA | 86..422 | 16..352 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6490439..6490630 | 259..68 | 960 | 100 | Minus |
2L | 23513712 | 2L | 6490288..6490373 | 345..260 | 430 | 100 | Minus |
2L | 23513712 | 2L | 6490706..6490758 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:25:22 has no hits.
BS22660.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:14:58 Download gff for
BS22660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9548-RA | 72..405 | 17..350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:17 Download gff for
BS22660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9548-RA | 87..420 | 17..350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:59 Download gff for
BS22660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9548-RA | 87..420 | 17..350 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:59 Download gff for
BS22660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6490282..6490373 | 260..350 | 96 | <- | Minus |
2L | 6490439..6490629 | 69..259 | 100 | <- | Minus |
2L | 6490706..6490757 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:17 Download gff for
BS22660.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6490282..6490373 | 260..350 | 96 | <- | Minus |
arm_2L | 6490439..6490629 | 69..259 | 100 | <- | Minus |
arm_2L | 6490706..6490757 | 17..68 | 100 | | Minus |
BS22660.pep Sequence
Translation from 16 to 351
> BS22660.pep
MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECN
YGSYQGRCVICGGPGVSDAYYCKSCTIQEKDRDGCPKIVNLGSSKTDLFY
ERKKYGFKQNY*
BS22660.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9548-PA | 111 | CG9548-PA | 1..111 | 1..111 | 633 | 100 | Plus |