Clone BS22703 Report

Search the DGRC for BS22703

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:227
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG6873-RA
Protein status:BS22703.pep: full length peptide match
Sequenced Size:479

Clone Sequence Records

BS22703.complete Sequence

479 bp assembled on 2011-01-25

GenBank Submission: KX803203

> BS22703.complete
GAAGTTATCAGTCGACATGGCATCTGGAATTAATTTGAGCCGCGAGTGTC
AGCACGTGTTCGAGCAGATCCGGAAGCTGAAGCAACATCGCTACGCGGTC
TTCGTCATCCAGGACGAGCGGGAGATTAAGGTGGAGGTGCTTGGAGTAAG
GGAGGCGAACTACGACGACTTCCTGGCGGATCTGCAACGTGCCGGATCCA
ATCAGTGCCGATTCGCTGTCTACGACTATGAGTATCAGCACCAGTGCCAG
GGCACCTTGTCCACCTGCCTGAAGGAGAAGCTAATCCTGATGCTCTGGTG
TCCCACTCTGGCCAGGATCAAGGACAAGATGCTCTACTCCAGCACGTTTG
CGGTGCTCAAGCGAGAGTTTCCCGGCGTCCAGAAGTGCATTCAGGCCACC
GAACCGGAGGAGGCGTGCCGCAATGCTGTCGAGGAGCAGCTGCGCTCCTT
GGACAGGGAGTAGAAGCTTTCTAGACCAT

BS22703.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6873-RA 447 CG6873-PA 1..447 17..463 2235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG6873-RA 680 CG6873-RA 171..618 16..463 2240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18739278..18739725 463..16 2240 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:35:31 has no hits.

BS22703.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:20 Download gff for BS22703.complete
Subject Subject Range Query Range Percent Splice Strand
CG6873-RA 172..618 17..463 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:40 Download gff for BS22703.complete
Subject Subject Range Query Range Percent Splice Strand
CG6873-RA 172..618 17..463 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:01 Download gff for BS22703.complete
Subject Subject Range Query Range Percent Splice Strand
CG6873-RA 172..618 17..463 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:01 Download gff for BS22703.complete
Subject Subject Range Query Range Percent Splice Strand
X 18739278..18739724 17..463 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:40 Download gff for BS22703.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18633311..18633757 17..463 100   Minus

BS22703.pep Sequence

Translation from 16 to 462

> BS22703.pep
MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYD
DFLADLQRAGSNQCRFAVYDYEYQHQCQGTLSTCLKEKLILMLWCPTLAR
IKDKMLYSSTFAVLKREFPGVQKCIQATEPEEACRNAVEEQLRSLDRE*

BS22703.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6873-PA 148 CG6873-PA 1..148 1..148 773 100 Plus
tsr-PA 148 CG4254-PA 1..148 1..148 434 52.7 Plus