BS22707.complete Sequence
401 bp assembled on 2011-01-25
GenBank Submission: KX804993
> BS22707.complete
GAAGTTATCAGTCGACATGGCAGATACCCGTAAAGACGCCGCGCCGCCGA
GCTACGAAGAAGTCATGAACAGTCCCTCGCAGGATTCCCGGCTGATAGTG
GGCGTGCATCAGGGAGCACCTAGTGCTCCGCCACCAAACATGCACATGCC
AACCTACGGAGCTTTCGAGACGACGCCGGTCAGCGTGGTGATTCAGCCTG
CTCCGGTCGCTATGCCCACCGAGATCATCGTGATTGGAGGATGCCCTGCA
TGTCGGATTGGATACCTGGAGGACACCTTCTCCGCCTGCGGACTGTGCTG
CGCAATCTTCTTCTTCCCGCTGGGAATTCTCTGTTGCTTGGCCATGCGTG
AGAAGCGCTGTTCCAACTGCGGAACGGTTTTCTAGAAGCTTTCTAGACCA
T
BS22707.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12012-RC | 369 | CG12012-PC | 1..369 | 17..385 | 1845 | 100 | Plus |
CG12012-RA | 369 | CG12012-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
CG12012-RB | 246 | CG12012-PB | 1..246 | 140..385 | 1230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12012-RC | 1185 | CG12012-RC | 125..494 | 17..386 | 1850 | 100 | Plus |
CG12012-RA | 880 | CG12012-RA | 125..494 | 17..386 | 1850 | 100 | Plus |
CG12012-RB | 931 | CG12012-RB | 242..545 | 83..386 | 1520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3376998..3377301 | 83..386 | 1520 | 100 | Plus |
3L | 28110227 | 3L | 3376881..3376947 | 17..83 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:35:35 has no hits.
BS22707.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:20 Download gff for
BS22707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12012-RA | 125..493 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:41 Download gff for
BS22707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12012-RA | 125..493 | 17..385 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:03 Download gff for
BS22707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12012-RA | 125..493 | 17..385 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:03 Download gff for
BS22707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3376881..3376947 | 17..83 | 100 | -> | Plus |
3L | 3376999..3377300 | 84..385 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:41 Download gff for
BS22707.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3376881..3376947 | 17..83 | 100 | -> | Plus |
arm_3L | 3376999..3377300 | 84..385 | 100 | | Plus |
BS22707.pep Sequence
Translation from 16 to 384
> BS22707.pep
MADTRKDAAPPSYEEVMNSPSQDSRLIVGVHQGAPSAPPPNMHMPTYGAF
ETTPVSVVIQPAPVAMPTEIIVIGGCPACRIGYLEDTFSACGLCCAIFFF
PLGILCCLAMREKRCSNCGTVF*
BS22707.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12012-PC | 122 | CG12012-PC | 1..122 | 1..122 | 665 | 100 | Plus |
CG12012-PA | 122 | CG12012-PA | 1..122 | 1..122 | 665 | 100 | Plus |
CG12012-PB | 81 | CG12012-PB | 1..81 | 42..122 | 449 | 100 | Plus |