BS22708.complete Sequence
359 bp assembled on 2011-01-25
GenBank Submission: KX803780
> BS22708.complete
GAAGTTATCAGTCGACATGACTAAGACAACGATGCATTGGCTGGCTCACT
TCCAGATCATCTTGCTATGCATTTGGTTGATGTGCCCCCCCAGTTCGCAG
GCCATAAAATGCGACACTTGTGGCAAGGAGTGTGCCAGCGCATGTGGCAC
AAAGCACTTTCGCACATGCTGCTTTAACTACCTTCGCAAGCGATCCGACC
CCGATGCACTGCGTCAGAGCTCGAACAGGAGGCTCATCGACTTCATACTG
CTGCAGGGGCGTGCCCTCTTCACCCAGGAGTTGCGAGAAAGGCGCCACAA
TGGCACATTGATGGACCTCGGCCTGAACACCTACTACCCCTAAAAGCTTT
CTAGACCAT
BS22708.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trissin-RB | 327 | CG14871-PB | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trissin-RB | 551 | CG14871-RB | 61..387 | 17..343 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15484894..15485075 | 343..162 | 910 | 100 | Minus |
3R | 32079331 | 3R | 15485129..15485222 | 162..69 | 470 | 100 | Minus |
3R | 32079331 | 3R | 15485284..15485336 | 69..17 | 265 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:35:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader6 | 4885 | invader6 INVADER6 4885bp | 726..757 | 257..226 | 106 | 81.2 | Minus |
BS22708.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:21 Download gff for
BS22708.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14871-RB | 61..385 | 17..341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:43 Download gff for
BS22708.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trissin-RB | 61..385 | 17..341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:05 Download gff for
BS22708.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trissin-RB | 61..385 | 17..341 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:05 Download gff for
BS22708.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15484896..15485074 | 163..341 | 100 | <- | Minus |
3R | 15485129..15485222 | 69..162 | 100 | <- | Minus |
3R | 15485285..15485336 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:43 Download gff for
BS22708.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11310618..11310796 | 163..341 | 100 | <- | Minus |
arm_3R | 11310851..11310944 | 69..162 | 100 | <- | Minus |
arm_3R | 11311007..11311058 | 17..68 | 100 | | Minus |
BS22708.pep Sequence
Translation from 16 to 342
> BS22708.pep
MTKTTMHWLAHFQIILLCIWLMCPPSSQAIKCDTCGKECASACGTKHFRT
CCFNYLRKRSDPDALRQSSNRRLIDFILLQGRALFTQELRERRHNGTLMD
LGLNTYYP*
BS22708.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trissin-PB | 108 | CG14871-PB | 1..108 | 1..108 | 597 | 100 | Plus |