BS22710.complete Sequence
524 bp assembled on 2011-01-25
GenBank Submission: KX800548
> BS22710.complete
GAAGTTATCAGTCGACATGAGCTTCCCCTTTCGTTTGGTGAACTTTGTGC
TGCAGTTGCTAACGGCGGTCCTGGAGGTTGTGGCCCTGGGTCTGCTCATC
CGAATCCTATCCACGCACTGTGTCCTGGGCGAGGAGTACGGCATATCGGT
GTGGATGTACACGTTCATCCTACCCGCCATCGCCTGTCAGAGCGTGGTTC
TCGTCATATTCCGGCTATGCTGCACCACCGTGGGCCTCGATCCAATTGCG
ATGACGTTTAATTTCGCCAGCGGCTTCCTGTGCCTAGGAAGCGCACTTGC
CCTCCTGGTGTCCATGGTCGATCATTGCGGCAACGAGTTCGCATACATAT
TCTATATGTCGAGCGCCTTTGGCGTAATCGCTGGGGTCCTGCATTTGCTG
AATGCCTGCGTGTGCAACGTTTACATTCCCAGCGGCGAATGGTCTTACAT
GAAACCTTCGAAGAGGGCAAGGAAAAAGGAGTTGAAAAATCCTAGACGCA
GAAGCTAGAAGCTTTCTAGACCAT
BS22710.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12426-RB | 492 | CG12426-PB | 1..492 | 17..508 | 2460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12426-RB | 649 | CG12426-RB | 48..539 | 17..508 | 2460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27871741..27871936 | 443..248 | 980 | 100 | Minus |
| 3R | 32079331 | 3R | 27872049..27872230 | 248..67 | 910 | 100 | Minus |
| 3R | 32079331 | 3R | 27871611..27871678 | 508..441 | 340 | 100 | Minus |
| 3R | 32079331 | 3R | 27872291..27872343 | 69..17 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:32:22 has no hits.
BS22710.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:31 Download gff for
BS22710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12426-RB | 48..539 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:31 Download gff for
BS22710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12426-RB | 48..539 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:13 Download gff for
BS22710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12426-RB | 48..539 | 17..508 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:13 Download gff for
BS22710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27871611..27871677 | 442..508 | 100 | <- | Minus |
| 3R | 27871743..27871936 | 248..441 | 100 | <- | Minus |
| 3R | 27872050..27872229 | 68..247 | 100 | <- | Minus |
| 3R | 27872293..27872343 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:31 Download gff for
BS22710.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23697333..23697399 | 442..508 | 100 | <- | Minus |
| arm_3R | 23697465..23697658 | 248..441 | 100 | <- | Minus |
| arm_3R | 23697772..23697951 | 68..247 | 100 | <- | Minus |
| arm_3R | 23698015..23698065 | 17..67 | 100 | | Minus |
BS22710.pep Sequence
Translation from 16 to 507
> BS22710.pep
MSFPFRLVNFVLQLLTAVLEVVALGLLIRILSTHCVLGEEYGISVWMYTF
ILPAIACQSVVLVIFRLCCTTVGLDPIAMTFNFASGFLCLGSALALLVSM
VDHCGNEFAYIFYMSSAFGVIAGVLHLLNACVCNVYIPSGEWSYMKPSKR
ARKKELKNPRRRS*
BS22710.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12426-PB | 163 | CG12426-PB | 1..163 | 1..163 | 845 | 100 | Plus |
