BS22711.complete Sequence
449 bp assembled on 2011-01-25
GenBank Submission: KX801404
> BS22711.complete
GAAGTTATCAGTCGACATGGATAAACATAAACCTACGTTGCTGCCGTATA
TTATGGACATGCTAAGTCGCGAGACGCAAATGTGCTCTTCTGTGGACGAC
GTGGTTAAACACATCAAGGACGTTATGCTCGAGGAGCACGTCAGAGCCTT
CGGGAGCCTCAAGCGTGCGGTGGAGTTTGCCCTGGAGTTGGGCGTCAACA
TGGGCATCCTCTCGATGACCAAGACGGTCCGCATGCCCATCAGGTACCGC
AGAAGTAAATCCAAGACTAAGGTGCCTGTCAGGAACAGGATCCCTCTCCG
CTTGGGACGCCAGCTGACCAAGCAGCGGATGGCGACGACCACGGCAACCA
AGTTGGCGGCCAAGAAGCGGTCAGGCGGACGCCTAAAAAAGCCCAAGAAG
ACTCCTGGGGCAGCGCCAAAGAAGCAAAACTAGAAGCTTTCTAGACCAT
BS22711.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17261-RB | 417 | CG17261-PB | 1..417 | 17..433 | 2085 | 100 | Plus |
| CG17261-RA | 417 | CG17261-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17261-RB | 869 | CG17261-RB | 390..809 | 17..436 | 2100 | 100 | Plus |
| CG17261-RA | 598 | CG17261-RA | 119..538 | 17..436 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3043181..3043533 | 84..436 | 1765 | 100 | Plus |
| 2L | 23513712 | 2L | 3043037..3043104 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:32:36 has no hits.
BS22711.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:31 Download gff for
BS22711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17261-RA | 119..535 | 17..433 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:35 Download gff for
BS22711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17261-RA | 119..535 | 17..433 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:18 Download gff for
BS22711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17261-RA | 119..535 | 17..433 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:18 Download gff for
BS22711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3043037..3043103 | 17..83 | 100 | -> | Plus |
| 2L | 3043181..3043530 | 84..433 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:35 Download gff for
BS22711.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3043037..3043103 | 17..83 | 100 | -> | Plus |
| arm_2L | 3043181..3043530 | 84..433 | 100 | | Plus |
BS22711.pep Sequence
Translation from 16 to 432
> BS22711.pep
MDKHKPTLLPYIMDMLSRETQMCSSVDDVVKHIKDVMLEEHVRAFGSLKR
AVEFALELGVNMGILSMTKTVRMPIRYRRSKSKTKVPVRNRIPLRLGRQL
TKQRMATTTATKLAAKKRSGGRLKKPKKTPGAAPKKQN*
BS22711.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17261-PB | 138 | CG17261-PB | 1..138 | 1..138 | 695 | 100 | Plus |
| CG17261-PA | 138 | CG17261-PA | 1..138 | 1..138 | 695 | 100 | Plus |
