Clone BS22712 Report

Search the DGRC for BS22712

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:227
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptCG30075-RA
Protein status:BS22712.pep: full length peptide match
Sequenced Size:620

Clone Sequence Records

BS22712.complete Sequence

620 bp assembled on 2011-01-25

GenBank Submission: KX802951

> BS22712.complete
GAAGTTATCAGTCGACATGCTCCCCAACGATAAAAAAGGTTTTAAAGCAG
CAAAGAACGATAAGTTCTCGACCCATGCCCTCCTCAATGAGAATGACAAC
GACCAATCACTAAGCTCCGATGAGCAGGACGACATATTTTTCCTGATCTA
TCGGAAGGCACATACTTTGTTCCAGGCAGGAAAGTTATGGATGAGGCGTA
TGCGTTATCACGATGCACAAAGGGCATTTGAGAAAGCGATAACACGCTTG
AAAACTTGCAAAACTAGCAGTTTCGAACAGCAGTGCCGTAAAAAAGATAT
GCTTATCGCCCTTTTCGAAAGCTTGATGATCTGCTTCAACAAGATGAGGC
AGTCCAGGTGCGTCTGCTATGTCATGAAGGAACTTCGTCTCCTGACCATC
AATAATCCTTCGGCTTTGGCGCTCTGTCAGCACGGTCGTGCCCTAAGCGA
CTTGGGTAAATACCATCCATCCCGTTTGTGCTACATAAAGGCGTTGAAAA
AACGTCCTAGAGACCAGGGTATCAAGGATAAGATTACCAGAATCAGCAAG
AGAATCACAGAACTTGAGGATACCAATCAGATGCTTTCTCAGCTGAGTAT
ATAAAAGCTTTCTAGACCAT

BS22712.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG30075-RA 588 CG30075-PA 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG30075-RA 703 CG30075-RA 45..632 17..604 2940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14376019..14376606 17..604 2940 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:35:14 has no hits.

BS22712.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:18 Download gff for BS22712.complete
Subject Subject Range Query Range Percent Splice Strand
CG30075-RA 45..630 17..602 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:36 Download gff for BS22712.complete
Subject Subject Range Query Range Percent Splice Strand
CG30075-RA 45..630 17..602 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:55 Download gff for BS22712.complete
Subject Subject Range Query Range Percent Splice Strand
CG30075-RA 45..630 17..602 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:55 Download gff for BS22712.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14376019..14376604 17..602 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:36 Download gff for BS22712.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10263524..10264109 17..602 100   Plus

BS22712.pep Sequence

Translation from 16 to 603

> BS22712.pep
MLPNDKKGFKAAKNDKFSTHALLNENDNDQSLSSDEQDDIFFLIYRKAHT
LFQAGKLWMRRMRYHDAQRAFEKAITRLKTCKTSSFEQQCRKKDMLIALF
ESLMICFNKMRQSRCVCYVMKELRLLTINNPSALALCQHGRALSDLGKYH
PSRLCYIKALKKRPRDQGIKDKITRISKRITELEDTNQMLSQLSI*

BS22712.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG30075-PA 195 CG30075-PA 1..195 1..195 1014 100 Plus
shu-PA 455 CG4735-PA 206..358 36..188 282 38.6 Plus