BS22712.complete Sequence
620 bp assembled on 2011-01-25
GenBank Submission: KX802951
> BS22712.complete
GAAGTTATCAGTCGACATGCTCCCCAACGATAAAAAAGGTTTTAAAGCAG
CAAAGAACGATAAGTTCTCGACCCATGCCCTCCTCAATGAGAATGACAAC
GACCAATCACTAAGCTCCGATGAGCAGGACGACATATTTTTCCTGATCTA
TCGGAAGGCACATACTTTGTTCCAGGCAGGAAAGTTATGGATGAGGCGTA
TGCGTTATCACGATGCACAAAGGGCATTTGAGAAAGCGATAACACGCTTG
AAAACTTGCAAAACTAGCAGTTTCGAACAGCAGTGCCGTAAAAAAGATAT
GCTTATCGCCCTTTTCGAAAGCTTGATGATCTGCTTCAACAAGATGAGGC
AGTCCAGGTGCGTCTGCTATGTCATGAAGGAACTTCGTCTCCTGACCATC
AATAATCCTTCGGCTTTGGCGCTCTGTCAGCACGGTCGTGCCCTAAGCGA
CTTGGGTAAATACCATCCATCCCGTTTGTGCTACATAAAGGCGTTGAAAA
AACGTCCTAGAGACCAGGGTATCAAGGATAAGATTACCAGAATCAGCAAG
AGAATCACAGAACTTGAGGATACCAATCAGATGCTTTCTCAGCTGAGTAT
ATAAAAGCTTTCTAGACCAT
BS22712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30075-RA | 588 | CG30075-PA | 1..588 | 17..604 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30075-RA | 703 | CG30075-RA | 45..632 | 17..604 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14376019..14376606 | 17..604 | 2940 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:35:14 has no hits.
BS22712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:18 Download gff for
BS22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30075-RA | 45..630 | 17..602 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:36 Download gff for
BS22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30075-RA | 45..630 | 17..602 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:55 Download gff for
BS22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30075-RA | 45..630 | 17..602 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:55 Download gff for
BS22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14376019..14376604 | 17..602 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:36 Download gff for
BS22712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10263524..10264109 | 17..602 | 100 | | Plus |
BS22712.pep Sequence
Translation from 16 to 603
> BS22712.pep
MLPNDKKGFKAAKNDKFSTHALLNENDNDQSLSSDEQDDIFFLIYRKAHT
LFQAGKLWMRRMRYHDAQRAFEKAITRLKTCKTSSFEQQCRKKDMLIALF
ESLMICFNKMRQSRCVCYVMKELRLLTINNPSALALCQHGRALSDLGKYH
PSRLCYIKALKKRPRDQGIKDKITRISKRITELEDTNQMLSQLSI*
BS22712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30075-PA | 195 | CG30075-PA | 1..195 | 1..195 | 1014 | 100 | Plus |
shu-PA | 455 | CG4735-PA | 206..358 | 36..188 | 282 | 38.6 | Plus |