BS22713.complete Sequence
803 bp assembled on 2011-01-25
GenBank Submission: KX804196
> BS22713.complete
GAAGTTATCAGTCGACATGAGGAAAATGCCTCTTGGACTACCCATTTGGA
CACCATTGTTCATCCTTTTCTTGCTTTTCCTGGCCGGCGTTTGGGGTGTG
AATCGCAATGGTCTGCTGGACTTTTATCATGAACAGGTTCATGGAACTCC
TTTAACTAAGAAGGAAGTCGAGTGTCCAGAGGATGGAATTATGAACATCA
AGCAAAGCCGTTACGATAGATCACTGAATCCTTTCAAGGCATTTCTGAAT
TGGCCGGATAGACACAAAGTACATAAGGATGATAAATATAAGCCACTTGA
AGGTGATTTGTATGGCCACGAAGAGCCTCTATTTGATTTTGAATTGACAA
AGTACCAAGCCGGTGCACCGCTAGTTGATAACAGAGCTGATCACTTTTTA
GCCCAAGATTATAAATCAGACTTTGATCGCAAGCTGGGTGTAATGGATCA
TGATTATCCCGATCATTTTAAGCTTAATGCAGATCACTTTAATCTTGATG
CAGATCAGTTTAATACGGTGTCAGACCGCTTGAATCAGAATGAAAATCAT
TTCAGTCTGGATGCAGATCAATTAAATCGTGATGCCAATCAATTCAACGT
GAATACAAATAACTTTAATCAGCATCGTGACGTGGATGTGCTTGACAACT
TTCAAGCTAACAAGCCCGAATTGGTAAATAGTCCCATGATGGACTATAAA
CGTGAATTCGCCAGCGATGAAGCTAATCCTTATGTTGAGAGCCTTCAGCA
GCGCTATGAGCCCTTACCACATGCTTATAAGGACTAGAAGCTTTCTAGAC
CAT
BS22713.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32718-RB | 771 | CG32718-PB | 1..771 | 17..787 | 3855 | 100 | Plus |
| CG32718-RD | 774 | CG32718-PD | 1..774 | 17..787 | 3790 | 99.6 | Plus |
| CG32718-RC | 786 | CG32718-PC | 1..786 | 17..787 | 3670 | 98.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32718-RB | 962 | CG32718-RB | 70..841 | 16..787 | 3860 | 100 | Plus |
| CG32718-RD | 965 | CG32718-RD | 70..844 | 16..787 | 3795 | 99.6 | Plus |
| CG32718-RC | 977 | CG32718-RC | 70..856 | 16..787 | 3675 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7778635..7779060 | 231..656 | 2130 | 100 | Plus |
| X | 23542271 | X | 7778436..7778571 | 95..230 | 680 | 100 | Plus |
| X | 23542271 | X | 7779117..7779249 | 655..787 | 665 | 100 | Plus |
| X | 23542271 | X | 7778274..7778355 | 16..97 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:35:56 has no hits.
BS22713.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:23 Download gff for
BS22713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32718-RB | 71..841 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:49 Download gff for
BS22713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32718-RB | 71..841 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:11 Download gff for
BS22713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32718-RB | 71..841 | 17..787 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:11 Download gff for
BS22713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7778275..7778353 | 17..95 | 100 | -> | Plus |
| X | 7778437..7778571 | 96..230 | 100 | -> | Plus |
| X | 7778635..7779060 | 231..656 | 100 | -> | Plus |
| X | 7779119..7779249 | 657..787 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:49 Download gff for
BS22713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7672308..7672386 | 17..95 | 100 | -> | Plus |
| arm_X | 7672470..7672604 | 96..230 | 100 | -> | Plus |
| arm_X | 7672668..7673093 | 231..656 | 100 | -> | Plus |
| arm_X | 7673152..7673282 | 657..787 | 100 | | Plus |
BS22713.pep Sequence
Translation from 16 to 786
> BS22713.pep
MRKMPLGLPIWTPLFILFLLFLAGVWGVNRNGLLDFYHEQVHGTPLTKKE
VECPEDGIMNIKQSRYDRSLNPFKAFLNWPDRHKVHKDDKYKPLEGDLYG
HEEPLFDFELTKYQAGAPLVDNRADHFLAQDYKSDFDRKLGVMDHDYPDH
FKLNADHFNLDADQFNTVSDRLNQNENHFSLDADQLNRDANQFNVNTNNF
NQHRDVDVLDNFQANKPELVNSPMMDYKREFASDEANPYVESLQQRYEPL
PHAYKD*
BS22713.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32718-PB | 256 | CG32718-PB | 1..256 | 1..256 | 1405 | 100 | Plus |
| CG32718-PD | 257 | CG32718-PD | 1..257 | 1..256 | 1393 | 99.6 | Plus |
| CG32718-PC | 261 | CG32718-PC | 1..261 | 1..256 | 1389 | 98.1 | Plus |
