Clone BS22717 Report

Search the DGRC for BS22717

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:227
Well:17
Vector:pDNR-Dual
Associated Gene/Transcriptver-RA
Protein status:BS22717.pep: full length peptide match
Sequenced Size:677

Clone Sequence Records

BS22717.complete Sequence

677 bp assembled on 2011-01-25

GenBank Submission: KX804569

> BS22717.complete
GAAGTTATCAGTCGACATGGATTTTAATCAGAGTTTCGAGGACATAGAAA
GCCAGCTGGATAACTTCGTGATACGCAAGAATCAACAGAGTGAAAAGTCC
ACGGGCAAATGTGGTCCGGAGGTCCACGACAACGTGCCGCTGACCATATC
CCAGATTGAGCGCGCAACTCAGGATCCGGAGAACGAGAATGTGTTCATCA
CAGACGACGTGCATCCGATTCACTTCTGCACCTGCATCATCTACGCCTTT
GTAACTGGCAATGGAACGCACAACGAGTCGTTCATGAAGTTCATGATCGA
TGATGGCACCGGCTCCCTGGAGGCCAGCATCACCAAAAAACCCTTCAATG
GACGCGTGATCAGCAGCCTGTACAGTGAAGCCAGTTCGCTGGCCTCGTCC
GAGGCCTACAAGAGCATTGCCGTGAGCATGATGCGGCTGCTGCAGGTCTC
CATGGAGTACATTGATCCCACGCGCATCTCGAGGGGCCACAGCCTATTCC
TGCGCGGTCGTCCGAATAGGTTCCGCGGCAAGATGGGTCTGGACGCTTTT
CAGTTCTTCATAGACAGCGGCCGATCGCGGAATATGGAAATTGGCTTCGT
AGACTACCTAACCGACTGGCAACGAAGGCATAAAACAATGCAGAATACAA
CAAATAAATAGAAGCTTTCTAGACCAT

BS22717.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
ver-RA 645 CG14121-PA 1..645 17..661 3225 100 Plus
ver-RB 645 CG14121-PB 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
ver-RA 808 CG14121-RA 99..743 17..661 3225 100 Plus
ver-RB 724 CG14121-RB 15..659 17..661 3225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12524441..12525085 17..661 3225 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:33:47 has no hits.

BS22717.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:06 Download gff for BS22717.complete
Subject Subject Range Query Range Percent Splice Strand
ver-RA 99..730 17..648 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:02 Download gff for BS22717.complete
Subject Subject Range Query Range Percent Splice Strand
ver-RB 15..646 17..648 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:17 Download gff for BS22717.complete
Subject Subject Range Query Range Percent Splice Strand
ver-RB 15..646 17..648 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:17 Download gff for BS22717.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12524441..12525072 17..648 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:02 Download gff for BS22717.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12517541..12518172 17..648 100   Plus

BS22717.pep Sequence

Translation from 16 to 660

> BS22717.pep
MDFNQSFEDIESQLDNFVIRKNQQSEKSTGKCGPEVHDNVPLTISQIERA
TQDPENENVFITDDVHPIHFCTCIIYAFVTGNGTHNESFMKFMIDDGTGS
LEASITKKPFNGRVISSLYSEASSLASSEAYKSIAVSMMRLLQVSMEYID
PTRISRGHSLFLRGRPNRFRGKMGLDAFQFFIDSGRSRNMEIGFVDYLTD
WQRRHKTMQNTTNK*

BS22717.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:34
Subject Length Description Subject Range Query Range Score Percent Strand
ver-PA 214 CG14121-PA 1..214 1..214 1118 100 Plus
ver-PB 214 CG14121-PB 1..214 1..214 1118 100 Plus