BS22719.complete Sequence
734 bp assembled on 2011-01-25
GenBank Submission: KX804795
> BS22719.complete
GAAGTTATCAGTCGACATGGTAGAGGGCATGATAAAAAAGCTAACTGCTA
TTTTATTTGGGCTTGTATTGGCTGTGTTATTTCGAGTAATTATACCCTTT
ACTCTGCGACTTAAAAGCGCTGAAATAACCATTAATGTGCTTAACTGTTT
TAATTTTCTAACAAGTACCGTTTCCATTACCATTTGCCTGAATTTGGTCA
GCCTATACTTAGCCAATTTGCGTGATGATTGGCTTGTTCTCGGGCTTATA
CCGCTGCAGATACTCGTCCTTCATTGGACTTACTTCACAATTTCAAAACA
ACTAGAAGCCATGAACAGGAGCTATAGTACATTCATGGATAGCTTAAACC
TTAAATGGCTGGCATACTCCAATTTTAACGAGACAGATTGGCCTTCGATT
GAAAATGCGGTTTTATGCTGTGGACTGGAGGGTCCCCGTTCTTATATGGA
TTATCTACAAGGGGTTCCAACCCACTGCTACCATCCCGACCTTATCACCC
AAGGTTGCAGTGACTTTGTTAAAAACATTTTTATGCCGATACAACATATA
AGTCATTTGCAGCTCAGATTGGCTATTTTTGTGGAACTGGTAATTTTACT
TATTCTTGCTGCAACGCTTTTGAAGAAATGTATTTCTTTGATCGGCGAAA
GGAAACATAAAAGAGTTATTACACACGGGCTTGCGGTACTAATAGATTTA
GTTAAAAACACATTTTGAAAGCTTTCTAGACCAT
BS22719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:33:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31600-RA | 702 | CG31600-PA | 1..702 | 17..718 | 3510 | 100 | Plus |
| CG31600-RB | 687 | CG31600-PB | 1..687 | 17..718 | 3250 | 97.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:33:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31600-RA | 929 | CG31600-RA | 57..760 | 17..720 | 3520 | 100 | Plus |
| CG31600-RB | 914 | CG31600-RB | 57..745 | 17..720 | 3260 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:33:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21914438..21914749 | 720..409 | 1560 | 100 | Minus |
| 2L | 23513712 | 2L | 21915016..21915199 | 244..61 | 920 | 100 | Minus |
| 2L | 23513712 | 2L | 21914800..21914967 | 411..244 | 840 | 100 | Minus |
| 2L | 23513712 | 2L | 21915258..21915302 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:33:55 has no hits.
BS22719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:07 Download gff for
BS22719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31600-RA | 57..757 | 17..717 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:05 Download gff for
BS22719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31600-RA | 57..757 | 17..717 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:22 Download gff for
BS22719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31600-RA | 57..757 | 17..717 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:22 Download gff for
BS22719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21914441..21914748 | 410..717 | 100 | <- | Minus |
| 2L | 21914802..21914966 | 245..409 | 100 | <- | Minus |
| 2L | 21915016..21915198 | 62..244 | 100 | <- | Minus |
| 2L | 21915258..21915302 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:05 Download gff for
BS22719.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21914441..21914748 | 410..717 | 100 | <- | Minus |
| arm_2L | 21914802..21914966 | 245..409 | 100 | <- | Minus |
| arm_2L | 21915016..21915198 | 62..244 | 100 | <- | Minus |
| arm_2L | 21915258..21915302 | 17..61 | 100 | | Minus |
BS22719.pep Sequence
Translation from 16 to 717
> BS22719.pep
MVEGMIKKLTAILFGLVLAVLFRVIIPFTLRLKSAEITINVLNCFNFLTS
TVSITICLNLVSLYLANLRDDWLVLGLIPLQILVLHWTYFTISKQLEAMN
RSYSTFMDSLNLKWLAYSNFNETDWPSIENAVLCCGLEGPRSYMDYLQGV
PTHCYHPDLITQGCSDFVKNIFMPIQHISHLQLRLAIFVELVILLILAAT
LLKKCISLIGERKHKRVITHGLAVLIDLVKNTF*
BS22719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31600-PA | 233 | CG31600-PA | 1..233 | 1..233 | 1201 | 100 | Plus |
| CG31600-PB | 228 | CG31600-PB | 1..228 | 1..233 | 1161 | 97.9 | Plus |
