BS22721.complete Sequence
950 bp assembled on 2011-01-25
GenBank Submission: KX800777
> BS22721.complete
GAAGTTATCAGTCGACATGAAGTGTAATTTTAAGGTGGCCCGGCTGAGGG
GTTTTAGTTTCGATTGTACCGCGCATATACCAACCATGACAAATAGGTGG
AATCTTACGGTGCTGCTGGGTCTGACTCTGCTGGCTCTTCAGGGGCCAAC
GGAAGCCATGAGGATGCGAGGAGAACCACTTCCGGGTTTGGCCAATATCG
AGAGGCATCGCTCCACCGAAGCTGTGCCCCAAGGTCGTGTGATCGGTGGC
ACCACCGCCGCCGAGGGCAACTGGCCCTGGATAGCAAGTATCCAAAATGC
ATACTCGTATCACTTGTGCGGAGCCATCATACTCGACGAAACTTGGGTGC
TCACAGCGGCCAGTTGCGTGGCGGGATTGAGGCCATTAAATCTGCTGGTT
GTGACTGGAACTGTGGACTGGTGGGATCTGTATGCTCCGTACTACACTGT
GAGCCAGATCCATGTGCACTGCAACTTCGACAAGCCGCTGTATCACAATG
ACATAGCCCTGCTGCAGTTGTCGTCCAAAATCGAGTTCAACGATGTGACA
AAGAATATAACCTTGGCGGATATCGATGAATTGGAAGAGGGGGATAAGTT
GACCTTTGCCGGTTGGGGCAGCTCCGAGGCCATGGGCACCTATGGTCGCT
ATCTGCAGGAGGCATCCGGCACATATCTGCCGGTGGACGCATGCCGGGAG
AAGTTGCAGAACCAAGATGATGTGGACCTGGGTCATGTGTGTGTCCAAAT
GGACGCGGGCCAGGGCGCCTGCCATGGCGACACTGGCGGACCGCTTATCG
ATGAGCAGCAGCGCTTGGTAGGCATCGGTAATTGGGGTGTGCCATGCGGA
CGTGGCTATCCGGATGTGTATGCGCGTACTGCCTTCTACCACGATTGGAT
CCGCACCACCATGAATGGATGTACGATCGCCTAGAAGCTTTCTAGACCAT
BS22721.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31266-RB | 849 | CG31266-PB | 1..849 | 86..934 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:34:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31266-RB | 993 | CG31266-RB | 1..872 | 63..934 | 4360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17132616..17133462 | 17..863 | 4235 | 100 | Plus |
| 3R | 32079331 | 3R | 17133526..17133598 | 862..934 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:34:00 has no hits.
BS22721.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:08 Download gff for
BS22721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 1..849 | 86..934 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:07 Download gff for
BS22721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 1..872 | 63..934 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:27 Download gff for
BS22721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 1..872 | 63..934 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:27 Download gff for
BS22721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17132616..17133461 | 17..862 | 100 | -> | Plus |
| 3R | 17133527..17133598 | 863..934 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:07 Download gff for
BS22721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12958338..12959183 | 17..862 | 100 | -> | Plus |
| arm_3R | 12959249..12959320 | 863..934 | 100 | | Plus |
BS22721.pep Sequence
Translation from 16 to 933
> BS22721.pep
MKCNFKVARLRGFSFDCTAHIPTMTNRWNLTVLLGLTLLALQGPTEAMRM
RGEPLPGLANIERHRSTEAVPQGRVIGGTTAAEGNWPWIASIQNAYSYHL
CGAIILDETWVLTAASCVAGLRPLNLLVVTGTVDWWDLYAPYYTVSQIHV
HCNFDKPLYHNDIALLQLSSKIEFNDVTKNITLADIDELEEGDKLTFAGW
GSSEAMGTYGRYLQEASGTYLPVDACREKLQNQDDVDLGHVCVQMDAGQG
ACHGDTGGPLIDEQQRLVGIGNWGVPCGRGYPDVYARTAFYHDWIRTTMN
GCTIA*
BS22721.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31266-PB | 282 | CG31266-PB | 1..282 | 24..305 | 1535 | 100 | Plus |
| CG31267-PA | 275 | CG31267-PA | 11..275 | 34..305 | 640 | 44.1 | Plus |
| CG5246-PA | 272 | CG5246-PA | 31..265 | 64..299 | 527 | 43.7 | Plus |
| CG31265-PA | 266 | CG31265-PA | 3..260 | 33..301 | 493 | 39.8 | Plus |
| CG31269-PB | 273 | CG31269-PB | 6..261 | 30..301 | 484 | 40.4 | Plus |
