Clone BS22722 Report

Search the DGRC for BS22722

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:227
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG32271-RA
Protein status:BS22722.pep: full length peptide match
Sequenced Size:779

Clone Sequence Records

BS22722.complete Sequence

779 bp assembled on 2011-01-25

GenBank Submission: KX804620

> BS22722.complete
GAAGTTATCAGTCGACATGGCGACGCTATGGCTCGTGCTCCACCTGATCC
CACTTTGCTGGGCGGCCAGCAACGAGGCCAACAGTCGGATTGTGGGCGGT
GTACCGGTGGACATCGCTAGTGTGCCCTACTTGGTGAACCTGCGCATCGG
TGGCAACTTTATGTGCGGCGGTTCATTGGTTACCCCCCAGCATGTTGTCA
CCGCTGCCCACTGCGTCAAGGGAATTGGCGCTTCTCGTATCCTAGTCGTT
GCCGGGGTAACGAGACTTACGGAGACGGGTGTCAGAAGTGGTGTGGACAA
GGTTTATACCCCAAAGGCTTACAACACCCGCACCCTCACCTCGGACGTGG
CTGTTTTAAAACTAAAAGCTCCCATCAGCGGTCCCAAAGTGTCCACCATT
GAGCTGTGCAATACCAGCTTCAAGGCAGGCGATCTGATCAAGGTCTCTGG
CTGGGGACAAATTACGGAGCGCAACAAGGCAGTTTCAATGCAGGTGCGCA
GCGTAGATGTGGCGCTCATTCCGCGTAAGGCATGCATGAGCCAGTATAAG
CTGCGCGGAACCATCACCAACACCATGTTTTGCGCCTCAGTGCCTGGCGT
CAAGGATGCCTGCGAAGGCGACTCTGGAGGACCTGCCGTCTATCAGGGTC
AACTATGCGGAATTGTCTCGTGGGGCGTTGGATGCGCACGAAAGAGTTCG
CCGGGAGTCTATACCAATGTCAAGACTGTTAGGAGCTTTATCGACAAGGC
TTTGGGCATGTAGAAGCTTTCTAGACCAT

BS22722.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32271-RA 747 CG32271-PA 1..747 17..763 3735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32271-RA 925 CG32271-RA 103..850 17..764 3740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3202313..3203060 764..17 3740 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:35:51 has no hits.

BS22722.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:22 Download gff for BS22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 103..849 17..763 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:47 Download gff for BS22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 103..849 17..763 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:09 Download gff for BS22722.complete
Subject Subject Range Query Range Percent Splice Strand
CG32271-RA 103..849 17..763 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:09 Download gff for BS22722.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3202314..3203060 17..763 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:47 Download gff for BS22722.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3202314..3203060 17..763 100   Minus

BS22722.pep Sequence

Translation from 16 to 762

> BS22722.pep
MATLWLVLHLIPLCWAASNEANSRIVGGVPVDIASVPYLVNLRIGGNFMC
GGSLVTPQHVVTAAHCVKGIGASRILVVAGVTRLTETGVRSGVDKVYTPK
AYNTRTLTSDVAVLKLKAPISGPKVSTIELCNTSFKAGDLIKVSGWGQIT
ERNKAVSMQVRSVDVALIPRKACMSQYKLRGTITNTMFCASVPGVKDACE
GDSGGPAVYQGQLCGIVSWGVGCARKSSPGVYTNVKTVRSFIDKALGM*

BS22722.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32271-PA 248 CG32271-PA 1..248 1..248 1284 100 Plus
CG3650-PA 249 CG3650-PA 1..247 4..246 550 44.8 Plus
CG33159-PA 257 CG33159-PA 7..252 4..246 484 42.7 Plus
CG32270-PA 259 CG32270-PA 30..251 24..242 475 45.5 Plus
CG32269-PB 332 CG32269-PB 100..324 16..241 447 40.5 Plus