BS22722.complete Sequence
779 bp assembled on 2011-01-25
GenBank Submission: KX804620
> BS22722.complete
GAAGTTATCAGTCGACATGGCGACGCTATGGCTCGTGCTCCACCTGATCC
CACTTTGCTGGGCGGCCAGCAACGAGGCCAACAGTCGGATTGTGGGCGGT
GTACCGGTGGACATCGCTAGTGTGCCCTACTTGGTGAACCTGCGCATCGG
TGGCAACTTTATGTGCGGCGGTTCATTGGTTACCCCCCAGCATGTTGTCA
CCGCTGCCCACTGCGTCAAGGGAATTGGCGCTTCTCGTATCCTAGTCGTT
GCCGGGGTAACGAGACTTACGGAGACGGGTGTCAGAAGTGGTGTGGACAA
GGTTTATACCCCAAAGGCTTACAACACCCGCACCCTCACCTCGGACGTGG
CTGTTTTAAAACTAAAAGCTCCCATCAGCGGTCCCAAAGTGTCCACCATT
GAGCTGTGCAATACCAGCTTCAAGGCAGGCGATCTGATCAAGGTCTCTGG
CTGGGGACAAATTACGGAGCGCAACAAGGCAGTTTCAATGCAGGTGCGCA
GCGTAGATGTGGCGCTCATTCCGCGTAAGGCATGCATGAGCCAGTATAAG
CTGCGCGGAACCATCACCAACACCATGTTTTGCGCCTCAGTGCCTGGCGT
CAAGGATGCCTGCGAAGGCGACTCTGGAGGACCTGCCGTCTATCAGGGTC
AACTATGCGGAATTGTCTCGTGGGGCGTTGGATGCGCACGAAAGAGTTCG
CCGGGAGTCTATACCAATGTCAAGACTGTTAGGAGCTTTATCGACAAGGC
TTTGGGCATGTAGAAGCTTTCTAGACCAT
BS22722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32271-RA | 747 | CG32271-PA | 1..747 | 17..763 | 3735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32271-RA | 925 | CG32271-RA | 103..850 | 17..764 | 3740 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3202313..3203060 | 764..17 | 3740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:35:51 has no hits.
BS22722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:22 Download gff for
BS22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32271-RA | 103..849 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:47 Download gff for
BS22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32271-RA | 103..849 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:09 Download gff for
BS22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32271-RA | 103..849 | 17..763 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:09 Download gff for
BS22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3202314..3203060 | 17..763 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:47 Download gff for
BS22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3202314..3203060 | 17..763 | 100 | | Minus |
BS22722.pep Sequence
Translation from 16 to 762
> BS22722.pep
MATLWLVLHLIPLCWAASNEANSRIVGGVPVDIASVPYLVNLRIGGNFMC
GGSLVTPQHVVTAAHCVKGIGASRILVVAGVTRLTETGVRSGVDKVYTPK
AYNTRTLTSDVAVLKLKAPISGPKVSTIELCNTSFKAGDLIKVSGWGQIT
ERNKAVSMQVRSVDVALIPRKACMSQYKLRGTITNTMFCASVPGVKDACE
GDSGGPAVYQGQLCGIVSWGVGCARKSSPGVYTNVKTVRSFIDKALGM*
BS22722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32271-PA | 248 | CG32271-PA | 1..248 | 1..248 | 1284 | 100 | Plus |
CG3650-PA | 249 | CG3650-PA | 1..247 | 4..246 | 550 | 44.8 | Plus |
CG33159-PA | 257 | CG33159-PA | 7..252 | 4..246 | 484 | 42.7 | Plus |
CG32270-PA | 259 | CG32270-PA | 30..251 | 24..242 | 475 | 45.5 | Plus |
CG32269-PB | 332 | CG32269-PB | 100..324 | 16..241 | 447 | 40.5 | Plus |