BS22726.complete Sequence
998 bp assembled on 2011-01-25
GenBank Submission: KX802655
> BS22726.complete
GAAGTTATCAGTCGACATGGCCAAGACCAGCTTATGTCTGGTACCAATTC
TCTGTCAATTTCTGGGACTACATGCCGCTTTGCTAGACTCTTTACTTAAT
CAGAGTACCATATACTACCTTAAACCATCAGCGGATGTTTCCCTGGAGAA
TGTGGAACAGTTGTCGTCTGTGGAATCTGTTAAGTTGATTGTCCACGGTT
ACCTGGGATCTTGCACCCATGGCTCTATAATGCCTCTGAGAAATGCCTAT
ACTGCTCAGGGATATGAGAATGTTTTGGTGGCTGACTGGGGTCCTGTGGC
CAATCTAGATTATCCCAGTTCGCGATTGGCTGTGAAGAACGTGGCCCAGA
TTCTAGCCAAATTATTGGAGGAATTCCTACAGCGCCATGGGATCTCCTTA
GAAGGAGTCCATGTCATAGGACACAGCTTGGGAGCTCATATCGCAGGACG
AATTGGACGTTATTTCAACGGATCTTTGGGCAGAGTTACGGGTCTGGATC
CGGCTCTTCCCCTATTTTCAAGCCGATCGGATGATAGCTTGCACTCGAAT
GCCGCTCAATTCGTGGATGTGATTCACACGGACTATCCCTTGTTTGGCGA
CATTCGACCTCGAGGAACTGTGGACTTCTATCCGAATTTTGGACTGGCTC
CACAGCCAGGATGCGAAAATGTGGATGTTGTTGCTGCCAGTAAGCTACTC
CACGAGGCTTATAGTTGCAGTCACAATCGAGCAGTCATGTTCTACGCTGA
ATCAATTGGAATGCCTGAGAATTTTCCAGCGGTTTCTTGCAGTTTAACGG
CCATTAAAAGTCGGCGTGTAGAGGACTGCCTAAGGGAAAAATCAAAAACT
AATACAGAAAACGCAAATGATTATCAAACTGTCTTTATGGGCGAACATGT
TAACCGCAGCGCCACCTTGTACTATTATTTGGAAACTAATGGAGCGCCAC
CCTACGGCCAGGGCAGGAACTCACATTTCTGAAAGCTTTCTAGACCAT
BS22726.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10357-RC | 966 | CG10357-PC | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10357-RC | 1111 | CG10357-RC | 10..978 | 14..982 | 4845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3615697..3616162 | 245..710 | 2330 | 100 | Plus |
| 3L | 28110227 | 3L | 3615391..3615622 | 14..245 | 1160 | 100 | Plus |
| 3L | 28110227 | 3L | 3616222..3616420 | 711..909 | 995 | 100 | Plus |
| 3L | 28110227 | 3L | 3616475..3616549 | 908..982 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:34:44 has no hits.
BS22726.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:33 Download gff for
BS22726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10357-RC | 13..977 | 17..981 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:56 Download gff for
BS22726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10357-RC | 13..977 | 17..981 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:05 Download gff for
BS22726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10357-RC | 13..977 | 17..981 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:05 Download gff for
BS22726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3615394..3615622 | 17..245 | 100 | -> | Plus |
| 3L | 3615698..3616162 | 246..710 | 100 | -> | Plus |
| 3L | 3616222..3616420 | 711..909 | 100 | -> | Plus |
| 3L | 3616477..3616548 | 910..981 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:56 Download gff for
BS22726.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3615394..3615622 | 17..245 | 100 | -> | Plus |
| arm_3L | 3615698..3616162 | 246..710 | 100 | -> | Plus |
| arm_3L | 3616222..3616420 | 711..909 | 100 | -> | Plus |
| arm_3L | 3616477..3616548 | 910..981 | 100 | | Plus |
BS22726.pep Sequence
Translation from 16 to 981
> BS22726.pep
MAKTSLCLVPILCQFLGLHAALLDSLLNQSTIYYLKPSADVSLENVEQLS
SVESVKLIVHGYLGSCTHGSIMPLRNAYTAQGYENVLVADWGPVANLDYP
SSRLAVKNVAQILAKLLEEFLQRHGISLEGVHVIGHSLGAHIAGRIGRYF
NGSLGRVTGLDPALPLFSSRSDDSLHSNAAQFVDVIHTDYPLFGDIRPRG
TVDFYPNFGLAPQPGCENVDVVAASKLLHEAYSCSHNRAVMFYAESIGMP
ENFPAVSCSLTAIKSRRVEDCLREKSKTNTENANDYQTVFMGEHVNRSAT
LYYYLETNGAPPYGQGRNSHF*
BS22726.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10357-PC | 321 | CG10357-PC | 1..321 | 1..321 | 1678 | 100 | Plus |
| CG7367-PD | 358 | CG7367-PD | 95..351 | 40..316 | 375 | 33.6 | Plus |
| CG7367-PB | 358 | CG7367-PB | 95..351 | 40..316 | 375 | 33.6 | Plus |
| CG7367-PC | 389 | CG7367-PC | 126..382 | 40..316 | 375 | 33.6 | Plus |
| CG6277-PA | 341 | CG6277-PA | 83..338 | 36..314 | 360 | 32 | Plus |
