BS22727.complete Sequence
812 bp assembled on 2011-01-25
GenBank Submission: KX800428
> BS22727.complete
GAAGTTATCAGTCGACATGTCAGCATGGAAGATAGCCCCGTGTCGAGCAC
CGGGTATCCCCAAATTGGATGAGCAGGAGGAGAGCGACCTGGTGTCCAGC
GGCATAGATCCCAGCGACGCAGAGGAGGAAACCGATCTGGATGCCGCCTA
CGATGAGCTGGAGGAGATGAAGCAGCGTCTGATCACACTGCGTAATAAGA
TAATAATCACAAATCCAGATGCGTGCCAGGATCTAAAAATTCGGGATCTC
TGGACCCCAGAGGGCGGGGAACTGCAGGAGTTGCGTGACCAGAAGTGCCA
ACTTATTTGCCAACTTCAAGAGGCAACCCAGCACCTGAAGGACTCCCAAA
ATGAGCTCAAGGAACTGGAGACTTGGCGATGCCACCTCCAATTACGCATC
CATCAGGCAAAGCGGCAGCTTAGTCAGTTCGAGAACTTCAAACTGAAGGT
TATCCACCAATTCGGGCTGTGCATCGAGCGTTGGGAGAACCAGAAGACAT
GCAAACTGGACTGCACCACGTACCGCAAGGAAATGGCGGCCCACATCCTT
CACGCGGACAACTCCCGAAAGAGCGTGGTGTACCAAAAATGCCACAAGTC
CTACAGACGCCGCATCCGCGTCGAGCTTATGCTGGTCCGCGTTTTCCTGC
ACAATCTCTTCGAGGCGATGGTCAACGACTTTAGGTTCTTTAGCCGCCAC
ATGAGCATTAACTTCTCCGTTGGATCCACAGACCACACAGTTCCGGAAAC
TCCAATCAACACTGTTTCTTCTTCCGACCAGGAGAGCCGCAAATAAAAGC
TTTCTAGACCAT
BS22727.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12831-RC | 780 | CG12831-PC | 1..780 | 17..796 | 3900 | 100 | Plus |
| CG12831-RB | 780 | CG12831-PB | 1..780 | 17..796 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12831-RC | 3601 | CG12831-RC | 257..1038 | 16..797 | 3910 | 100 | Plus |
| CG12831-RB | 1051 | CG12831-RB | 257..1038 | 16..797 | 3910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7073201..7073896 | 711..16 | 3480 | 100 | Minus |
| 2R | 25286936 | 2R | 7073058..7073143 | 797..712 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:35:08 has no hits.
BS22727.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:34 Download gff for
BS22727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12831-RB | 222..999 | 17..794 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:01 Download gff for
BS22727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12831-RB | 222..999 | 17..794 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:13 Download gff for
BS22727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12831-RB | 258..1035 | 17..794 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:13 Download gff for
BS22727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7073061..7073143 | 712..794 | 100 | <- | Minus |
| 2R | 7073201..7073895 | 17..711 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:01 Download gff for
BS22727.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2960566..2960648 | 712..794 | 100 | <- | Minus |
| arm_2R | 2960706..2961400 | 17..711 | 100 | | Minus |
BS22727.pep Sequence
Translation from 16 to 795
> BS22727.pep
MSAWKIAPCRAPGIPKLDEQEESDLVSSGIDPSDAEEETDLDAAYDELEE
MKQRLITLRNKIIITNPDACQDLKIRDLWTPEGGELQELRDQKCQLICQL
QEATQHLKDSQNELKELETWRCHLQLRIHQAKRQLSQFENFKLKVIHQFG
LCIERWENQKTCKLDCTTYRKEMAAHILHADNSRKSVVYQKCHKSYRRRI
RVELMLVRVFLHNLFEAMVNDFRFFSRHMSINFSVGSTDHTVPETPINTV
SSSDQESRK*
BS22727.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12831-PC | 259 | CG12831-PC | 1..259 | 1..259 | 1367 | 100 | Plus |
| CG12831-PB | 259 | CG12831-PB | 1..259 | 1..259 | 1367 | 100 | Plus |
