BS22730.complete Sequence
527 bp assembled on 2011-01-25
GenBank Submission: KX804193
> BS22730.complete
GAAGTTATCAGTCGACATGGGTAGCGTTTTAAGTAGATCAGATCAGCCTA
GAGATTCTGTCGCCTACAGAAACTTCCTGACAGTCTACAGGAATCAGCAC
AAACAAATGAGTTCCAATGATGCACTTTTGAGTGCATCACGTGAATGGGG
AACTTTATCGCAGGCTCAGCGGAATCGATATGCTAACATGAAGGACTCCC
CCAAGCGGGGCACAAAAAACATAACGGAGAATGCGGCTGCTCGTAGAAAG
ATTACTAAAAAGAATTCCCGGTCGAAGAGAATTTCTCAGCGGCGGATTCA
AGATAAGGGGTCTGCTTATAAGCCGCTAACCCTCAACAGATCTTACGTAA
TACGGAAGAGTTTGGTTCCCTCAAGAGGCTTTCTAAACTTAGTGCAGTTC
TTCCAAGAGATCCATAGCGAAATGCCAAGATCGTTGGCCGTGAAAGAGGC
TGTTAGTTCCTGGTGCGCTATGAATGCGGATCAGCGTGGCATTTTCATAT
CAGACTTATAGAAGCTTTCTAGACCAT
BS22730.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpl94D-RA | 495 | CG31281-PA | 1..495 | 17..511 | 2475 | 100 | Plus |
| Tpl94D-RB | 492 | CG31281-PB | 1..492 | 17..511 | 2395 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpl94D-RA | 1491 | CG31281-RA | 104..598 | 17..511 | 2475 | 100 | Plus |
| Tpl94D-RB | 1488 | CG31281-RB | 104..595 | 17..511 | 2395 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22966628..22966949 | 190..511 | 1610 | 100 | Plus |
| 3R | 32079331 | 3R | 22966387..22966560 | 17..190 | 870 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:37:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 5717..5746 | 377..406 | 105 | 83.3 | Plus |
BS22730.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:36 Download gff for
BS22730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpl94D-RA | 87..581 | 17..511 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:29 Download gff for
BS22730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpl94D-RA | 104..598 | 17..511 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:59 Download gff for
BS22730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpl94D-RA | 104..598 | 17..511 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:59 Download gff for
BS22730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22966387..22966560 | 17..190 | 100 | -> | Plus |
| 3R | 22966629..22966949 | 191..511 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:29 Download gff for
BS22730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18792109..18792282 | 17..190 | 100 | -> | Plus |
| arm_3R | 18792351..18792671 | 191..511 | 100 | | Plus |
BS22730.pep Sequence
Translation from 16 to 510
> BS22730.pep
MGSVLSRSDQPRDSVAYRNFLTVYRNQHKQMSSNDALLSASREWGTLSQA
QRNRYANMKDSPKRGTKNITENAAARRKITKKNSRSKRISQRRIQDKGSA
YKPLTLNRSYVIRKSLVPSRGFLNLVQFFQEIHSEMPRSLAVKEAVSSWC
AMNADQRGIFISDL*
BS22730.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpl94D-PA | 164 | CG31281-PA | 1..164 | 1..164 | 828 | 100 | Plus |
| Tpl94D-PB | 163 | CG31281-PB | 1..163 | 1..164 | 811 | 99.4 | Plus |
