Clone BS22744 Report

Search the DGRC for BS22744

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:227
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG8038-RA
Protein status:BS22744.pep: gold
Sequenced Size:653

Clone Sequence Records

BS22744.complete Sequence

653 bp assembled on 2011-01-25

GenBank Submission: KX804197

> BS22744.complete
GAAGTTATCAGTCGACATGGAACACGCGACAAGTGAATTGAGGGAATTTA
TCTCAGATCTGGTGATTCCGCACCAGCGTTGCAATGTTAACATCAATCCG
GATCACATCACAATGCTGGAGGGCACCAAGATCAAGAAGCAGCACTCCCG
AAAACGTCGCGCCCACAAATCCAGTACGCTGAGTCGCCGGGAATATGCGG
CACTTGGTTTGAACACTCTTCCCACCAAGCAGATGAAGTACGAGGAGGCA
CTGCCACTGCACCACCTGTGGAAGGGCTATGTACGCGAGCATCTGGAGCT
GAGGGAAGGTGACGAGGTGCCCCAGGTGCACGATGCTCGCTACGACGAGT
TCAGCCGCAAGTTGGTGAAACTGGACTTGCACGGTGCCAAGATGAAGGTG
CTGCAGTCCAAGTGCTCCACCCTGGAAAATTTGGCTGGCATCTGCGTCAT
GGACACCAAGAACGTGCTGAAACTGCTCGGCAAGGACCATCGGCTGCGCA
CAATACCCAAGAGCGAGTGCGTCTTTGGTATGAAAGTGGGCAACATGGAG
TTCACCATATTCGGGCAGCACCTCAACATTCGACCCGCCGAGCGAAGCGT
TAAGAAGATCAAGAACTTTGTGAAGCCCTTCATGTAGAAGCTTTCTAGAC
CAT

BS22744.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG8038-RA 621 CG8038-PA 1..621 17..637 3105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG8038-RA 846 CG8038-RA 46..666 17..637 3105 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7977985..7978605 637..17 3105 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:44:49 has no hits.

BS22744.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:39 Download gff for BS22744.complete
Subject Subject Range Query Range Percent Splice Strand
CG8038-RA 35..655 17..637 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:14 Download gff for BS22744.complete
Subject Subject Range Query Range Percent Splice Strand
CG8038-RA 46..666 17..637 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:24 Download gff for BS22744.complete
Subject Subject Range Query Range Percent Splice Strand
CG8038-RA 46..666 17..637 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:24 Download gff for BS22744.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7977985..7978605 17..637 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:14 Download gff for BS22744.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7971085..7971705 17..637 100   Minus

BS22744.pep Sequence

Translation from 16 to 636

> BS22744.pep
MEHATSELREFISDLVIPHQRCNVNINPDHITMLEGTKIKKQHSRKRRAH
KSSTLSRREYAALGLNTLPTKQMKYEEALPLHHLWKGYVREHLELREGDE
VPQVHDARYDEFSRKLVKLDLHGAKMKVLQSKCSTLENLAGICVMDTKNV
LKLLGKDHRLRTIPKSECVFGMKVGNMEFTIFGQHLNIRPAERSVKKIKN
FVKPFM*

BS22744.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG8038-PA 206 CG8038-PA 1..206 1..206 1080 100 Plus