BS22770.complete Sequence
896 bp assembled on 2011-01-25
GenBank Submission: KX803305
> BS22770.complete
GAAGTTATCAGTCGACATGATGATTTCAGACAGTCAGAAGAAAGGACTGC
GGGAGTTACTTCTAAATGACAAGAACTTAACTGTTCTGCTACAGTTGGCC
AAAGGGGCCACCAAAAATATGTGCAAAACCGAAGACCCGGAGGAGGCCCT
TCGTCTGATCACTACACACATTCCAGACATTTACGTACTGCTTTCCAAGC
GCGCTATAAAAAAGGAACTCCTCTTTACGTATTTGAGCAATCGACGCGCT
GACGCAGCCACAGACTTTAGCAAGGCAGACCTCATAGCCAAGGTTATACA
GTATTGGAAGCAGGAGCATAAATCAAGCATAGAGCTTTCCGGAGACCAGA
CTTCCAGCTCACTTCATATTCAGAGCGAAGAGGATTATCCCATTCACACG
ATTGCCCGCAAGTTCGGCGAGTGGTTCTTCGAACGCTTCAACGCAGACGC
CCTTAGTCTGGTGGATTTATGGGCAGATGCGGCTCTACATCTCACGATCA
TAGCCAGTGATGGAATCAATGAGTGGGAGTGTACGACGGCTGCCGAGGTG
TTATCGGCACTAACGAGCGCTAAGCAGCAGTTTGACTTTTACTTTAATCC
AAACCTGACGCACGCCGGAATTCAGGGTCGAATGGACTCGTACGGACATT
TCTTAGTGATCTGCTGCGGCACTCTGCACTCCCGTGATAGCTGCGTCGGA
ATCTTTGAATGTGCCTTCGGGCTTTTTCGGGACCCCTTGGCTGACAACAA
CTGGAAACCCAAAAAAGTGAAGTGCTTCCTTAAAAGTGAAGCTCAGCCCC
CAGAGCTGCACTATCTGTGCTCGAGCGAAACTCTGCAGACAGCTCTGGAG
CTGTCAGTACCCTCTGATGACTTGAACTAGAAGCTTTCTAGACCAT
BS22770.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13876-RA | 864 | CG13876-PA | 1..864 | 17..880 | 4320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13876-RA | 1337 | CG13876-RA | 55..922 | 13..880 | 4340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 206375..207112 | 143..880 | 3690 | 100 | Plus |
| 3L | 28110227 | 3L | 206188..206318 | 13..143 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:17:25 has no hits.
BS22770.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:45 Download gff for
BS22770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 59..922 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:05 Download gff for
BS22770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 59..922 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:18 Download gff for
BS22770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13876-RA | 59..922 | 17..880 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:18 Download gff for
BS22770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 206192..206318 | 17..143 | 100 | -> | Plus |
| 3L | 206376..207112 | 144..880 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:05 Download gff for
BS22770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 206192..206318 | 17..143 | 100 | -> | Plus |
| arm_3L | 206376..207112 | 144..880 | 100 | | Plus |
BS22770.pep Sequence
Translation from 16 to 879
> BS22770.pep
MMISDSQKKGLRELLLNDKNLTVLLQLAKGATKNMCKTEDPEEALRLITT
HIPDIYVLLSKRAIKKELLFTYLSNRRADAATDFSKADLIAKVIQYWKQE
HKSSIELSGDQTSSSLHIQSEEDYPIHTIARKFGEWFFERFNADALSLVD
LWADAALHLTIIASDGINEWECTTAAEVLSALTSAKQQFDFYFNPNLTHA
GIQGRMDSYGHFLVICCGTLHSRDSCVGIFECAFGLFRDPLADNNWKPKK
VKCFLKSEAQPPELHYLCSSETLQTALELSVPSDDLN*
BS22770.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13876-PA | 287 | CG13876-PA | 1..287 | 1..287 | 1500 | 100 | Plus |
