BS22771.complete Sequence
440 bp assembled on 2011-01-25
GenBank Submission: KX802392
> BS22771.complete
GAAGTTATCAGTCGACATGTCGTCGATTTCTACGATCATTGGATTGTGTC
TTTTGTTCTTTATGCTGAGCAATGTGGATGCTTATGGGCAAAAATGTAGT
CCAGTCTTTGGAAATTGCAACATGCATACAGATTGCTGCAGCGGAAAATG
CTTAACCTACGGCTCACGTTGTGGCTATCCTGCGCACCGTCTTAAAGAAA
CATATTTGAGTGCCAGTGAATTTCAGAGTATCAAAAAACAACGGGCACAT
TCAAACAATGATGAGGTGAAAGTTATTGGTCTACCTAGTGAGTCAGAACC
ATCGAATGTTTTTTTTAAGATTGATTCGGCAGCAAAATGCCACAATGTTG
GTGAACCCTGCTCCCGGGGTGAAGAATGCTGTAATTTGAGATGTCACTCA
TATATGCACAGATGTGTCACCTAAAAGCTTTCTAGACCAT
BS22771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34034-RB | 408 | CG34034-PB | 1..408 | 17..424 | 2040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:18:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34034-RB | 637 | CG34034-RB | 12..420 | 17..425 | 2045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21738696..21738938 | 358..116 | 1215 | 100 | Minus |
| 3R | 32079331 | 3R | 21739001..21739099 | 115..17 | 495 | 100 | Minus |
| 3R | 32079331 | 3R | 21738562..21738628 | 425..359 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:18:32 has no hits.
BS22771.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:46 Download gff for
BS22771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34034-RB | 12..417 | 17..422 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:15 Download gff for
BS22771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34034-RB | 12..417 | 17..422 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:37 Download gff for
BS22771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34034-RB | 12..417 | 17..422 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:37 Download gff for
BS22771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21738565..21738628 | 359..422 | 100 | <- | Minus |
| 3R | 21738696..21738938 | 116..358 | 100 | <- | Minus |
| 3R | 21739001..21739099 | 17..115 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:15 Download gff for
BS22771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17564287..17564350 | 359..422 | 100 | <- | Minus |
| arm_3R | 17564418..17564660 | 116..358 | 100 | <- | Minus |
| arm_3R | 17564723..17564821 | 17..115 | 100 | | Minus |
BS22771.pep Sequence
Translation from 16 to 423
> BS22771.pep
MSSISTIIGLCLLFFMLSNVDAYGQKCSPVFGNCNMHTDCCSGKCLTYGS
RCGYPAHRLKETYLSASEFQSIKKQRAHSNNDEVKVIGLPSESEPSNVFF
KIDSAAKCHNVGEPCSRGEECCNLRCHSYMHRCVT*
BS22771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:12:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34034-PB | 135 | CG34034-PB | 1..135 | 1..135 | 747 | 100 | Plus |
