Clone BS22775 Report

Search the DGRC for BS22775

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:227
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptDpy-30L1-RA
Protein status:BS22775.pep: full length peptide match
Sequenced Size:437

Clone Sequence Records

BS22775.complete Sequence

437 bp assembled on 2011-01-25

GenBank Submission: KX804773

> BS22775.complete
GAAGTTATCAGTCGACATGGAGGCCAAGACCGACGCACCCATCTCACCAG
CGCCCACAACAAATCCGCCGGCAGAAGCTGGCAAGGAGCCAAATGCAAGC
AGCAATGCGCAAGCAAACCCGACCGCTGCGCCGGGAGCTCCTCCATCCGG
AGCCATTGCCGTTGGCCAGTCCACAAATCCAGTGGCGCAGCAGCAACAGC
AGCCGGCGGTGGCCAAGAAGCCCAGTAGCGAGACAAACAACATGCCCACG
CGACAGTACCTCGACCAGACGGTGGCGCCGGTTCTGCTCCACGGAATGCA
GGCCCTGGCTCGCGAACGGCCCACGGATCCCATACAGTTCCTGGCCTCCT
ACCTACTAAAGCATAGCAACGGGTGCGACGAGAACAACGCCTCCGCCGCC
GCCGTGGACAACAACTCCTAAAAGCTTTCTAGACCAT

BS22775.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-RA 405 CG6444-PA 1..405 17..421 2025 100 Plus
Dpy-30L2-RB 297 CG11591-PB 148..255 254..361 180 77.8 Plus
Dpy-30L2-RA 297 CG11591-PA 148..255 254..361 180 77.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-RA 655 CG6444-RA 165..570 16..421 2030 100 Plus
Dpy-30L2-RB 506 CG11591-RB 192..299 254..361 180 77.8 Plus
Dpy-30L2-RA 550 CG11591-RA 236..343 254..361 180 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10732817..10733222 16..421 2030 100 Plus
3L 28110227 3L 4047195..4047302 361..254 180 77.8 Minus
Blast to na_te.dros performed on 2014-11-26 15:35:50 has no hits.

BS22775.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:55 Download gff for BS22775.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 70..472 17..419 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:39 Download gff for BS22775.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 166..568 17..419 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:02 Download gff for BS22775.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 166..568 17..419 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:02 Download gff for BS22775.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10732818..10733220 17..419 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:39 Download gff for BS22775.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10732818..10733220 17..419 100   Plus

BS22775.pep Sequence

Translation from 16 to 420

> BS22775.pep
MEAKTDAPISPAPTTNPPAEAGKEPNASSNAQANPTAAPGAPPSGAIAVG
QSTNPVAQQQQQPAVAKKPSSETNNMPTRQYLDQTVAPVLLHGMQALARE
RPTDPIQFLASYLLKHSNGCDENNASAAAVDNNS*

BS22775.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-PA 134 CG6444-PA 1..134 1..134 691 100 Plus
Dpy-30L2-PB 98 CG11591-PB 34..92 64..122 226 67.8 Plus
Dpy-30L2-PA 98 CG11591-PA 34..92 64..122 226 67.8 Plus