BS22779.complete Sequence
416 bp assembled on 2011-01-25
GenBank Submission: KX800823
> BS22779.complete
GAAGTTATCAGTCGACATGTACAAGCTCCTTCTCGTCGTCGCCCTTTTCG
GATGCGCCCTGGCCGCGCCACTGAACGATGATACCATCACCAAGTTCTTG
GCCAACCAGGATACGGACGGCACCTACGCCTATGATATCGAGCAGGCCAG
CGGTATCCAGATCAAGGAGGAGGGTTTGGCCGGACACGAAGCTCACGGAT
CGTACTCCTACATCTCTCCCGAGGGTATTCCCGTCCAGGTGGTGTACACC
GCCGATGAGTTCGGCTTCCACCCACAGTCCAACCTCCTGCCCACTCCACC
ACCAATCCCAGAGGAGATCCTGCGCTCCATCCGCTACATCCAGGAGCATC
CCACTCCCGAGGAGCTGGCCGATCGTGCTGTTCGCGCCCAGCAGATCTAG
AAGCTTTCTAGACCAT
BS22779.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr65Ea-RA | 384 | CG8640-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
| Lcp4-RB | 339 | CG2044-PB | 226..328 | 251..353 | 185 | 78.6 | Plus |
| Lcp4-RA | 339 | CG2044-PA | 226..328 | 251..353 | 185 | 78.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr65Ea-RA | 540 | CG8640-RA | 39..425 | 15..401 | 1935 | 100 | Plus |
| Lcp4-RB | 527 | CG2044-RB | 275..377 | 251..353 | 185 | 78.6 | Plus |
| Lcp4-RA | 792 | CG2044-RA | 275..377 | 251..353 | 185 | 78.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7086118..7086490 | 401..29 | 1865 | 100 | Minus |
| 2R | 25286936 | 2R | 8437978..8438080 | 251..353 | 185 | 78.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:37:23 has no hits.
BS22779.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:56 Download gff for
BS22779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ea-RA | 39..422 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:02 Download gff for
BS22779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ea-RA | 41..424 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:40 Download gff for
BS22779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr65Ea-RA | 41..424 | 17..400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:40 Download gff for
BS22779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7086119..7086490 | 29..400 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:02 Download gff for
BS22779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7079219..7079590 | 29..400 | 100 | <- | Minus |
BS22779.pep Sequence
Translation from 16 to 399
> BS22779.pep
MYKLLLVVALFGCALAAPLNDDTITKFLANQDTDGTYAYDIEQASGIQIK
EEGLAGHEAHGSYSYISPEGIPVQVVYTADEFGFHPQSNLLPTPPPIPEE
ILRSIRYIQEHPTPEELADRAVRAQQI*
BS22779.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr65Ea-PA | 127 | CG8640-PA | 1..127 | 1..127 | 661 | 100 | Plus |
| Edg78E-PB | 122 | CG7673-PB | 1..113 | 1..112 | 267 | 47.4 | Plus |
| Edg78E-PA | 122 | CG7673-PA | 1..113 | 1..112 | 267 | 47.4 | Plus |
| Cpr67Fa1-PA | 134 | CG7941-PA | 1..117 | 1..112 | 255 | 47 | Plus |
| Cpr67Fa2-PA | 134 | CG18349-PA | 1..117 | 1..112 | 252 | 46.2 | Plus |
