Clone BS22786 Report

Search the DGRC for BS22786

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:227
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG13332-RA
Protein status:BS22786.pep: gold
Sequenced Size:458

Clone Sequence Records

BS22786.complete Sequence

458 bp assembled on 2011-01-25

GenBank Submission: KX802032

> BS22786.complete
GAAGTTATCAGTCGACATGTCCACCGACGAGGATTCCCTGGGCAGTCCCC
TCAAGCCGGCCACGCCCACACCCGGCGAGCGCGAACCGACGCGAGAACGC
CATCGAGGCGGTCGATCTGGAGCCTCGGATCTGCTGCGCCATCAGCAGAG
CTTTGAGGCTCGCTACAGCGGGATCATCCAGAAGCAAATCTGGGAGACGA
GCATCAACAAGGATGTGCTGGAACGTCAGCTAAATGCGTACTTCCCTTTC
TCCAGGAGCGCCTCGCTGACCAAGGACGCATCCGGCGGATTCGATCAGCT
CCTGGCGCCGGCGACAAGTGGAACTGGTCCGAAGTCTCGATCCCTGGCCA
CCACGCCCACCAGGCGACCGGCGGGCGTCTGTCTGGAGAAGCTGGAGACG
GTGGATGTGGCCTCCCTCGATCAACAGAAGCAAGCGAAGTAAAAGCTTTC
TAGACCAT

BS22786.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-RA 426 CG13332-PA 1..426 17..442 2130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-RA 1072 CG13332-RA 102..528 16..442 2135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13525478..13525904 16..442 2135 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:41:11 has no hits.

BS22786.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:58 Download gff for BS22786.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 103..526 17..440 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:03:37 Download gff for BS22786.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 103..526 17..440 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:59 Download gff for BS22786.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 103..526 17..440 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:59 Download gff for BS22786.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13525479..13525902 17..440 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:03:37 Download gff for BS22786.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9412984..9413407 17..440 100   Plus

BS22786.pep Sequence

Translation from 16 to 441

> BS22786.pep
MSTDEDSLGSPLKPATPTPGEREPTRERHRGGRSGASDLLRHQQSFEARY
SGIIQKQIWETSINKDVLERQLNAYFPFSRSASLTKDASGGFDQLLAPAT
SGTGPKSRSLATTPTRRPAGVCLEKLETVDVASLDQQKQAK*

BS22786.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-PA 141 CG13332-PA 1..141 1..141 721 100 Plus