BS22805.complete Sequence
368 bp assembled on 2011-01-25
GenBank Submission: KX805673
> BS22805.complete
GAAGTTATCAGTCGACATGGCAGAGACACCAGAATCCCAGGCAGCGCTGA
GCACTTCCTCCTCCACACCTGCAGATAAGGATGGTTCCAAAATTTGTATC
CTTCTGAACGCCACTGGCAATGTGCCCATCATCAAAAAGCGAACCTGGAC
CGTAGATCCCAACAAGACAGTCGGCTGGATACAGACGTTCATCCACAAGT
TTCTGAAACTCGATGCCAGCGAGCAAATTTTCCTGTACGTTAATCAGACA
TTTGCACCTGCCCCGGATCAGATAATCAAGAACTTGTACGAGTGCCATGG
AACCAATGGGAAACTGGTGCTCTACTACTGCAAGAATCAGGCGTGGGGCT
AAAAGCTTTCTAGACCAT
BS22805.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:24:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Atg12-RB | 336 | CG10861-PB | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:24:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Atg12-RB | 469 | CG10861-RB | 50..386 | 17..353 | 1685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:24:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12137159..12137295 | 93..229 | 685 | 100 | Plus |
3L | 28110227 | 3L | 12137353..12137476 | 230..353 | 620 | 100 | Plus |
3L | 28110227 | 3L | 12137016..12137091 | 17..92 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:24:49 has no hits.
BS22805.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:14:53 Download gff for
BS22805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Atg12-RB | 243..576 | 17..350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:03 Download gff for
BS22805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Atg12-RB | 50..383 | 17..350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:46 Download gff for
BS22805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Atg12-RB | 50..383 | 17..350 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:46 Download gff for
BS22805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12137016..12137091 | 17..92 | 100 | -> | Plus |
3L | 12137159..12137295 | 93..229 | 100 | -> | Plus |
3L | 12137353..12137473 | 230..350 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:03 Download gff for
BS22805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12130116..12130191 | 17..92 | 100 | -> | Plus |
arm_3L | 12130259..12130395 | 93..229 | 100 | -> | Plus |
arm_3L | 12130453..12130573 | 230..350 | 100 | | Plus |
BS22805.pep Sequence
Translation from 16 to 351
> BS22805.pep
MAETPESQAALSTSSSTPADKDGSKICILLNATGNVPIIKKRTWTVDPNK
TVGWIQTFIHKFLKLDASEQIFLYVNQTFAPAPDQIIKNLYECHGTNGKL
VLYYCKNQAWG*
BS22805.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Atg12-PB | 111 | CG10861-PB | 1..111 | 1..111 | 594 | 100 | Plus |