Clone BS22849 Report

Search the DGRC for BS22849

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:228
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG10799-RA
Protein status:BS22849.pep: full length peptide match
Sequenced Size:533

Clone Sequence Records

BS22849.complete Sequence

533 bp assembled on 2011-01-25

GenBank Submission: KX801529

> BS22849.complete
GAAGTTATCAGTCGACATGCGTCGATCTGTTTTGCTGTTCCTAATCTCCG
CCATTGTGCTGAGCGCGGCACTTCCTTTGCCCCCAATTTGGGAGGACTCC
GAATCGGATTCCGAGTATAATGATTATAGTGAGCTATCGAAGCAGCAGAA
TCTGAAGAGCAGTATCGAGAAAACTATCAGCAAGCGAGCTACCAAGGACA
CTAGTAACAGCACGGAAGATGATGAGCTCACGGATGGTAGCAATGAGAAT
GTTAACGATAAAATGGACAGCTCAATGGAATCGTCTTCTATGCTGATCAT
GGCATCCGAGGAAGAATCGGAGTCCGCTGTCAGAAGGCGCAGGTCTGGTG
AGAGGAACAGGAATATAGGGCTCCTGGCCACGATTTGCCCAAATGCTGAT
TTCAGAGATTTGGAGAACGGTATTACCCTAGATTCTAGAATTGAAATAAG
GGATATGTATGCGATTTGTAAAACTCTACCAGAGTCCGGTCGTCTACAGC
AATACAACCGTTCATAAAAGCTTTCTAGACCAT

BS22849.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10799-RA 501 CG10799-PA 1..501 17..517 2505 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG10799-RA 592 CG10799-RA 66..567 17..518 2510 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13257951..13258452 17..518 2510 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:25:01 has no hits.

BS22849.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:14:54 Download gff for BS22849.complete
Subject Subject Range Query Range Percent Splice Strand
CG10799-RA 66..564 17..515 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:07 Download gff for BS22849.complete
Subject Subject Range Query Range Percent Splice Strand
CG10799-RA 66..564 17..515 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:51 Download gff for BS22849.complete
Subject Subject Range Query Range Percent Splice Strand
CG10799-RA 66..564 17..515 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:51 Download gff for BS22849.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13257951..13258449 17..515 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:07 Download gff for BS22849.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9145456..9145954 17..515 100   Plus

BS22849.pep Sequence

Translation from 16 to 516

> BS22849.pep
MRRSVLLFLISAIVLSAALPLPPIWEDSESDSEYNDYSELSKQQNLKSSI
EKTISKRATKDTSNSTEDDELTDGSNENVNDKMDSSMESSSMLIMASEEE
SESAVRRRRSGERNRNIGLLATICPNADFRDLENGITLDSRIEIRDMYAI
CKTLPESGRLQQYNRS*

BS22849.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG10799-PA 166 CG10799-PA 1..166 1..166 826 100 Plus