BS22893.complete Sequence
689 bp assembled on 2011-01-25
GenBank Submission: KX801702
> BS22893.complete
GAAGTTATCAGTCGACATGGGTAAGGGTAACAATATGATTCCGAATCAGC
ACTACCACAAGTGGTGGCAGCGGCATGTGAAGACCTGGTTCAACCAGCCG
GCCCGCAAGGTCCGCAGGCATGCGAACCGCGTCAAGAAGGCTAAGGCCGT
CTTCCCCCGCCCAGCCAGCGGTGCCCTGCGCCCTGTGGTTCGCTGCCCCA
CCATCCGCTACCACACCAAGCTGCGTGCCGGCCGTGGTTTCACCCTGGAG
GAGCTGAAGGGTGCCGGCATTGGCGCCAACTTCGCCAAGACCATCGGCAT
TGCCGTCGACAGGAGGCGCAAGAACAAATCCCTGGAGTCCCGCCAGCGTA
ACATCCAGCGCCTCAAGGAGTACCGCAGCAAGTTGATCCTGTTCCCCATC
AACGAGAAGAAGATCCGCGCCGGCGAGTCCTCTCTGGAGGAGTGCAAGCT
GGCTACCCAGCTTAAGGGACCCGTCCTGCCCATCAAAAATGAGCAGCCCG
CCGTGGTCGAGTTCCGTGAGGTGACCAAGGATGAGAAGAAGTTCAAGGCC
TTCGCCACGCTGCGCAAGGCTCGCACTGATGCCCGTTTGGTCGGAATCCG
CGCCAAGCGCGCCAAGGAGGCCGCTGAGAGCGAGGACGCCGCCAAGGGAG
ACCCCAAGAAAGCCAAGAAGTAAAAGCTTTCTAGACCAT
BS22893.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL13-RC | 657 | CG4651-PC | 1..657 | 17..673 | 3270 | 99.8 | Plus |
RpL13-RB | 657 | CG4651-PB | 1..657 | 17..673 | 3270 | 99.8 | Plus |
RpL13-RA | 657 | CG4651-PA | 1..657 | 17..673 | 3270 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL13-RC | 1186 | CG4651-RC | 306..963 | 17..674 | 3275 | 99.8 | Plus |
RpL13-RB | 774 | CG4651-RB | 48..705 | 17..674 | 3275 | 99.8 | Plus |
RpL13-RA | 791 | CG4651-RA | 65..722 | 17..674 | 3275 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9967937..9968248 | 258..569 | 1560 | 100 | Plus |
2L | 23513712 | 2L | 9967635..9967878 | 17..260 | 1220 | 100 | Plus |
2L | 23513712 | 2L | 9968315..9968422 | 567..674 | 525 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:25:09 has no hits.
BS22893.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:14:56 Download gff for
BS22893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL13-RB | 48..702 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:11 Download gff for
BS22893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL13-RA | 65..719 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:53 Download gff for
BS22893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL13-RA | 65..719 | 17..671 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:53 Download gff for
BS22893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9967939..9968247 | 260..568 | 100 | -> | Plus |
2L | 9968317..9968419 | 569..671 | 99 | | Plus |
2L | 9967635..9967877 | 17..259 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:11 Download gff for
BS22893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9967635..9967877 | 17..259 | 100 | -> | Plus |
arm_2L | 9967939..9968247 | 260..568 | 100 | -> | Plus |
arm_2L | 9968317..9968419 | 569..671 | 99 | | Plus |
BS22893.pep Sequence
Translation from 16 to 672
> BS22893.pep
MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPA
SGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRR
RKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLK
GPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAK
EAAESEDAAKGDPKKAKK*
BS22893.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL13-PC | 218 | CG4651-PC | 1..218 | 1..218 | 1126 | 100 | Plus |
RpL13-PB | 218 | CG4651-PB | 1..218 | 1..218 | 1126 | 100 | Plus |
RpL13-PA | 218 | CG4651-PA | 1..218 | 1..218 | 1126 | 100 | Plus |