BS22895.complete Sequence
743 bp assembled on 2011-01-25
GenBank Submission: KX804595
> BS22895.complete
GAAGTTATCAGTCGACATGGTCGTGGCAGCATCCACCTGCCGCACGGAGA
CGGTCTTCGATTACAGCTGGATGAACGTGGTGGTCGCCTACTGGAACCGC
TACCCGAATCCCTCAAGCACGCACGTCCTCACCGAGGACACTATTCAGCG
GGAGGTGCGCGATGGCAAGCTCTTCTCGCGCCGGCTGCTCTCCAAGACGA
ATCCGGTGCCGAAGTGGGGAGCTCGCTTCTACAACAATGTGCCGGTCAAG
ATTGTTGAGGACTCCGTGCTGGACCCGGTTAAAAAGACATTCACCACTTT
CACCAGGAACCTGGGAATGACCAAGATAATGAAAGTCGATGAAATTGTCG
TCTACAGCGAGCAGAAGGATGGTAGTACTCTGGCGGTGCGAAGAGCATAC
ATTAGTTCGCAGGTGTTCGGATTCTCGCGGGCCATTCGCGCCTTCGGCAT
CGAACGGTTTAAGGCCAATGGCAACAAGGCCTCCAATGGATTCAACTACG
TGCTGCGGCGCATGTTTCCGGACAGTTTGGTTGGTGGAGGACATCACCAG
CACGCGGTGACGACGACTTCGCCAGCTGGAGAACTTCCTGCAACGACCAT
CACCGTATCCACAACAAACGGCAGTCTCAACAACCAAGGAGCTCTCAAGA
GCGCCGCAAAAGTGGGCTACGAGTTCTTCAAGAGTCATGCCTCCAAGATT
GCGCAACTGTTTTCTGTCAAGAACTGAAAGCTTTCTAGACCAT
BS22895.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| prel-RB | 711 | CG8806-PB | 1..711 | 17..727 | 3555 | 100 | Plus |
| prel-RC | 711 | CG8806-PC | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| prel-RB | 1547 | CG8806-RB | 370..1082 | 15..727 | 3565 | 100 | Plus |
| prel-RC | 1550 | CG8806-RC | 373..1085 | 15..727 | 3565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9425246..9425642 | 331..727 | 1985 | 100 | Plus |
| 2R | 25286936 | 2R | 9424599..9424915 | 15..331 | 1585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:25:05 has no hits.
BS22895.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:14:55 Download gff for
BS22895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prel-RB | 388..1097 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:10 Download gff for
BS22895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prel-RC | 375..1084 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:52 Download gff for
BS22895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prel-RC | 375..1084 | 17..726 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:52 Download gff for
BS22895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9424601..9424915 | 17..331 | 100 | -> | Plus |
| 2R | 9425247..9425641 | 332..726 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:10 Download gff for
BS22895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5312106..5312420 | 17..331 | 100 | -> | Plus |
| arm_2R | 5312752..5313146 | 332..726 | 100 | | Plus |
BS22895.pep Sequence
Translation from 16 to 726
> BS22895.pep
MVVAASTCRTETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDG
KLFSRRLLSKTNPVPKWGARFYNNVPVKIVEDSVLDPVKKTFTTFTRNLG
MTKIMKVDEIVVYSEQKDGSTLAVRRAYISSQVFGFSRAIRAFGIERFKA
NGNKASNGFNYVLRRMFPDSLVGGGHHQHAVTTTSPAGELPATTITVSTT
NGSLNNQGALKSAAKVGYEFFKSHASKIAQLFSVKN*
BS22895.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| prel-PB | 236 | CG8806-PB | 1..236 | 1..236 | 1217 | 100 | Plus |
| prel-PC | 236 | CG8806-PC | 1..236 | 1..236 | 1217 | 100 | Plus |
| slmo-PE | 215 | CG9131-PE | 6..162 | 10..163 | 173 | 26.1 | Plus |
| slmo-PD | 215 | CG9131-PD | 6..162 | 10..163 | 173 | 26.1 | Plus |
| slmo-PC | 215 | CG9131-PC | 6..162 | 10..163 | 173 | 26.1 | Plus |
