BS22909.complete Sequence
1175 bp assembled on 2011-03-18
GenBank Submission: KX802515
> BS22909.complete
GAAGTTATCAGTCGACATGTTTATTTGGCATTACTTGACCCTCTTGTGCC
TTGGGTTCGCCCTCATCGATGCGAAATCCATCAAGAAGTCGCAGGCCAAT
CTGTTGGAGCCAACTCTTGATCCTGATGAGAAGCTAGGGAAGATTGGGAA
GTCCCCACCCGACATTTCCAATGATGTGCAACGTGTGCAGGTTCCATTAG
GTGCGACGCCCGGCAAGAATGGCTGGCAGGGCAAGTGGTTTCCCCATGCC
CCTGGACAACAGCAGGAAGCGATTGAATTAAAAATGAAGAGCACCACGGA
GGAAGTTCCTCCGCTGGAGTTCACAACCAAGGATGGCTGGCAGGGCAAGT
GGTTTCCACAAGCTCCCGGAGAGCCGCACTTGGTGAAGAAAAAACCGCTG
GTCGATAACAAAACCAAGTCGGGGAAGTCCACCACACAGGATACTTGGCA
GGGTAAATTGTTTCCGCAGGGTCCCAATGAATCGCACAAGACTAAACAAA
GCAGCTGTGATGATGGCAAGAGCAATCTTGCCGTGGACTTCGATCCAAAC
GACATCCGTGACAGCCTGAATTTCCTATGCATCAGTAGTAATCACAGCTT
GTACCAACCGGATTTGTCCAGAGAAGCCATTCTTACGGAGCACTTTCTAC
CTAGCGCCTATCTGCCGCCTGCCAAGTGCCTTAATGAGTCCATTAGCTAC
TCCCATCTGCCTGCCACCAATGGCCCCTATCGCCCGATGCCCGCTGAATA
TGGCACCTATTCCTACTTGCCTCCTCAGCGATACGTGCGTAATCTGGCAG
AAGGTGCCATCGTAATGCTCTACCATCCCTGCGCTTTTCCCGGCCAAGTG
AAGCAGCTGCAAGACATCGTGGGTGGCTGTCTGTATCGCCATCTGGTGTC
ACCCTCGCTGGCTCTGAGTCCGCAGCGACCGCTGGCCCTGCTCGCCTGGA
GTCGCAGCCTCGAGATGTCCGTCGTGGATCGACAACTGGCGGCGGACTTC
ATCCAGAAACACGCCAAGCAAGGACCACTTGCACCGGAGGAATTGTCGCG
TTTGATTGTCAAGAGACAGACCTACAAGGAGGGCCTTCTTAGGGAAGCGC
ACTTGGTCAACACGGCGGACGACTACGAGCTGTGCGGCTACCTACAGGAG
GATATGTAGAAGCTTTCTAGACCAT
BS22909.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:33:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12093-RA | 1143 | CG12093-PA | 1..1143 | 17..1159 | 5700 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12093-RA | 1296 | CG12093-RA | 106..1248 | 17..1159 | 5700 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2773399..2773902 | 520..17 | 2520 | 100 | Minus |
| 3L | 28110227 | 3L | 2772608..2773046 | 1159..721 | 2180 | 99.8 | Minus |
| 3L | 28110227 | 3L | 2773105..2773306 | 720..519 | 1010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:33:07 has no hits.
BS22909.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 10:11:58 Download gff for
BS22909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12093-RA | 106..1242 | 23..1159 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:07 Download gff for
BS22909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12093-RA | 112..1248 | 23..1159 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:16 Download gff for
BS22909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12093-RA | 112..1248 | 23..1159 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:16 Download gff for
BS22909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2772608..2773046 | 721..1159 | 99 | <- | Minus |
| 3L | 2773105..2773304 | 521..720 | 100 | <- | Minus |
| 3L | 2773399..2773896 | 23..520 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:07 Download gff for
BS22909.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2773105..2773304 | 521..720 | 100 | <- | Minus |
| arm_3L | 2772608..2773046 | 721..1159 | 99 | <- | Minus |
| arm_3L | 2773399..2773896 | 23..520 | 100 | | Minus |
BS22909.pep Sequence
Translation from 16 to 1158
> BS22909.pep
MFIWHYLTLLCLGFALIDAKSIKKSQANLLEPTLDPDEKLGKIGKSPPDI
SNDVQRVQVPLGATPGKNGWQGKWFPHAPGQQQEAIELKMKSTTEEVPPL
EFTTKDGWQGKWFPQAPGEPHLVKKKPLVDNKTKSGKSTTQDTWQGKLFP
QGPNESHKTKQSSCDDGKSNLAVDFDPNDIRDSLNFLCISSNHSLYQPDL
SREAILTEHFLPSAYLPPAKCLNESISYSHLPATNGPYRPMPAEYGTYSY
LPPQRYVRNLAEGAIVMLYHPCAFPGQVKQLQDIVGGCLYRHLVSPSLAL
SPQRPLALLAWSRSLEMSVVDRQLAADFIQKHAKQGPLAPEELSRLIVKR
QTYKEGLLREAHLVNTADDYELCGYLQEDM*
BS22909.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12093-PA | 380 | CG12093-PA | 1..380 | 1..380 | 2039 | 100 | Plus |
