BS22917.complete Sequence
1206 bp assembled on 2011-02-15
GenBank Submission: KX802697
> BS22917.complete
GAAGTTATCAGTCGACATGCGGACGCATCTTTTTGCGCTTTGCCTGTCTA
TGGCTACAATAGGCATACCCAAAGCTAATGGAGTCATGGACGATTACGAT
GCTGAGATGGGGGAGTTCATGAATGCTCTACCGAACCTCGATGATACCCC
CTATGGCTTAGGACAGCGATCAGATATCTCAACGGAACCGGAAGAGGATG
ATATTTTGGCAAGCCTGGATGATGAGTATGAGGAGGCTAAGCATTGCGTC
TGGAACACTTGTGACAAGGATCTCAGCGAATCGCGGGGAATCGGAAAGTT
TCTGGACCTACCCTTTATAAAGAAGATAGCAAGTAACCTGAATCCATTCG
GCAGCAAGAAACTTCGCATGCACTTCTATCTCTTTAAGAGGGAGTTCCCT
GAGTGTGGCAGAGAGGTGGATTTCTCAATCGAGCGCAAATGGAGGCATTG
TGGCTTTAATGCTTCTCTGCCCACACGACTGATGATACACGGTTGGATGA
GCCAGTCGCGTGGCTCTTTCAATCGGGATGTGAAGAATGCATACCTAAAA
AAAGGGGAGTACAATGTGATCGTTGTCGATTGGAGCGCAAGCTCAGCCAA
CATAAACTACTTTTCGGTGGTAAAGCTTATAGAGACCTTTGGAGCTGAGT
TGGCCCAATTTATAAGGAACCTCAATCGTCAGTTTGGAGCTGACTTCGAC
AGCATGTATCTTATTGGTCACTCCTTGGGAGCTCAGATCGCTGGTTCTGC
CGGGAAACGTTTGAAACCGGTTAAAGTAAATACAATATTTGCTTTGGATC
CCGCAGGTCCAAAGTTCCGTCATCGCGGAACTGAATTTCGGATAGATCCC
AGCGATGCAAAGTATGTGGAGTCCATGCATACGAGTGCTAACTTTGGGTT
TCGTCGGCCTACAGGCAGTGCCACCTTTTATCCAAACTACGGGGCCTATC
AGCATAGCTGCTACTACCTAGGTTGCTCCCATATTCGATCATATCAGATG
TTCGCCGAGTCCATCAATTCGCCTTTGGGATTCTGGGGGACCCCTTGCAT
CCGAGACAATGGAAGGTGGCAGTGCGATTATAGCCAGCGACAGTCCATCC
AGATGGCCGGTGAGCCTTCGATTCATAAAGAAGGCATATTCTACGTGAAG
ACCTCCAGCAGTGATCCATTCGCCCTTGGAAAGCAATAAAAGCTTTCTAG
ACCATA
BS22917.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6675-RB | 1173 | CG6675-PB | 1..1173 | 17..1189 | 5850 | 99.9 | Plus |
| CG6675-RC | 1161 | CG6675-PC | 1..1161 | 17..1189 | 5635 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6675-RB | 1425 | CG6675-RB | 153..1325 | 17..1189 | 5850 | 99.9 | Plus |
| CG6675-RC | 1413 | CG6675-RC | 153..1313 | 17..1189 | 5635 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:04:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22109221..22110349 | 61..1189 | 5630 | 99.9 | Plus |
| 2L | 23513712 | 2L | 22109116..22109162 | 17..63 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 02:04:07 has no hits.
BS22917.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:48 Download gff for
BS22917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6675-RB | 153..1323 | 17..1187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:37 Download gff for
BS22917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6675-RB | 153..1323 | 17..1187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:36:53 Download gff for
BS22917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6675-RB | 153..1323 | 17..1187 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:36:53 Download gff for
BS22917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22109116..22109161 | 17..62 | 100 | -> | Plus |
| 2L | 22109223..22110347 | 63..1187 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:37 Download gff for
BS22917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22109116..22109161 | 17..62 | 100 | -> | Plus |
| arm_2L | 22109223..22110347 | 63..1187 | 99 | | Plus |
BS22917.pep Sequence
Translation from 16 to 1188
> BS22917.pep
MRTHLFALCLSMATIGIPKANGVMDDYDAEMGEFMNALPNLDDTPYGLGQ
RSDISTEPEEDDILASLDDEYEEAKHCVWNTCDKDLSESRGIGKFLDLPF
IKKIASNLNPFGSKKLRMHFYLFKREFPECGREVDFSIERKWRHCGFNAS
LPTRLMIHGWMSQSRGSFNRDVKNAYLKKGEYNVIVVDWSASSANINYFS
VVKLIETFGAELAQFIRNLNRQFGADFDSMYLIGHSLGAQIAGSAGKRLK
PVKVNTIFALDPAGPKFRHRGTEFRIDPSDAKYVESMHTSANFGFRRPTG
SATFYPNYGAYQHSCYYLGCSHIRSYQMFAESINSPLGFWGTPCIRDNGR
WQCDYSQRQSIQMAGEPSIHKEGIFYVKTSSSDPFALGKQ*
BS22917.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:12:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6675-PB | 390 | CG6675-PB | 1..390 | 1..390 | 2100 | 100 | Plus |
| CG6675-PC | 386 | CG6675-PC | 1..386 | 1..390 | 2063 | 99 | Plus |
| CG4267-PB | 374 | CG4267-PB | 37..354 | 81..388 | 821 | 51.7 | Plus |
| CG4267-PA | 374 | CG4267-PA | 37..354 | 81..388 | 821 | 51.7 | Plus |
| CG7367-PD | 358 | CG7367-PD | 104..351 | 147..388 | 410 | 37.7 | Plus |
