BS22918.complete Sequence
1256 bp assembled on 2011-03-18
GenBank Submission: KX805793
> BS22918.complete
GAAGTTATCAGTCGACATGTTAATTCAACTGGTCTTCCTGGGCATCCTAT
TGTGGGCGTCCTTCTTTTGGCTGCAGTGCCGCTACCTGGATGTCCTGGAA
CTCCTCTTCGCCTGGATAGGCAATCAGTTGGCGGAAACTCGCAGGAGGCG
AGCTCGCGAAGAACGGTGCCGCCTGGGCAAAAAGTGGGCGGTCGGAAATA
AGGGCGATGGCATGGAGAAGCTGCTCTCGCCGCCGATCAAGAATCGTCTC
AATATCCGAGTGGAGCAGTGCTGCGACTTCATAACCGCCGGCTTGGGCTT
GGTGCTCGAGGACGACGTGACCCAGAGGTTTGTGGCCCCACCTTCGCCAG
CTGGGGAATGGAATCTGCTGACCCGCAACCTTCGTCAGAGGAATCGATAC
CTCAGCTGGCGTTTAAGGACGGTCTGGCTGCTGGGCTGGGTTGTACGCTA
CGGACTGCTTTTGCCCTTCAGGACCATTGGCTGCTGGCTGTGCCTGTTCA
TGATCAGTGGAGTCTCAATGCTGCTGGGTCACATTCCCGACTGGTGCTTC
AAGAAAAAGTTGGTGGAGCTGGTATTGCGGCAGTGCTTCCGAATCACGGC
CGCCTGCCTGCCGATGATCCGCAGATTCCACAACACGGAGTATCGGCCCA
CCAAGGGCATCTGTGTGTGCAATCACACGAGCCCCTTAGACGTCCTGGTG
CTGATGTGCGATGCCAACTACTCGCTGACGGGCCAGGTTCACACCGGCAT
CCTGGGCGTCCTGCAGCGCGCCCTGTCGAGGGTCTCCCACCACATGTGGT
TCGACCGCAAGGAACTGGCCGATCGTGAGGCTCTGGGTCTGGTGCTCCGC
CTACACTGCTCCATGAAGGATCGGCCGCCGGTCCTGCTCTTCCCCGAGGG
CACTTGCATCAACAACACCGCCGTAATGCAGTTCAAAAAGGGTAGCTTCG
CGGTCAGCGACGTCGTTCATCCAGTGGCCATTCGATACGATCGCCGATTC
GGCGAGGCCTATTGGGACAGCACCCGTTACTCTATGCTCAGATACATGCT
GATGGTGGTCAGCTCGTGGTGCATTTGCTGCGATGTTTGGTACATGCCGG
CACTCAGCCGGTGCAACGACGAGTCCCCAGTAGAGTTTTCGAATCGAGTG
AAGGCCGCAATCGCCGCCCAGGCGAATATCGATGATCTGCCCTGGGACGG
AAACCTAAAACGCTGGAGTCCCGTCAGGGACTGGCAATAGAAGCTTTCTA
GACCAT
BS22918.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15450-RA | 1224 | CG15450-PA | 1..1224 | 17..1240 | 6120 | 100 | Plus |
| CG3209-RC | 1380 | CG3209-PC | 970..1113 | 878..1021 | 240 | 77.8 | Plus |
| CG3209-RE | 1143 | CG3209-PE | 733..876 | 878..1021 | 240 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15450-RA | 1490 | CG15450-RA | 140..1364 | 16..1240 | 6125 | 100 | Plus |
| CG3209-RC | 1751 | CG3209-RC | 1120..1263 | 878..1021 | 240 | 77.8 | Plus |
| CG3209-RE | 1807 | CG3209-RE | 1176..1319 | 878..1021 | 240 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20824291..20825515 | 16..1240 | 6125 | 100 | Plus |
| 2R | 25286936 | 2R | 24072855..24072959 | 878..982 | 210 | 80 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:33:16 has no hits.
BS22918.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 10:11:59 Download gff for
BS22918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 146..1364 | 22..1240 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:12 Download gff for
BS22918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 146..1364 | 22..1240 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:19 Download gff for
BS22918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 146..1364 | 22..1240 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:19 Download gff for
BS22918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20824297..20825515 | 22..1240 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:12 Download gff for
BS22918.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20695324..20696542 | 22..1240 | 100 | | Plus |
BS22918.pep Sequence
Translation from 16 to 1239
> BS22918.pep
MLIQLVFLGILLWASFFWLQCRYLDVLELLFAWIGNQLAETRRRRAREER
CRLGKKWAVGNKGDGMEKLLSPPIKNRLNIRVEQCCDFITAGLGLVLEDD
VTQRFVAPPSPAGEWNLLTRNLRQRNRYLSWRLRTVWLLGWVVRYGLLLP
FRTIGCWLCLFMISGVSMLLGHIPDWCFKKKLVELVLRQCFRITAACLPM
IRRFHNTEYRPTKGICVCNHTSPLDVLVLMCDANYSLTGQVHTGILGVLQ
RALSRVSHHMWFDRKELADREALGLVLRLHCSMKDRPPVLLFPEGTCINN
TAVMQFKKGSFAVSDVVHPVAIRYDRRFGEAYWDSTRYSMLRYMLMVVSS
WCICCDVWYMPALSRCNDESPVEFSNRVKAAIAAQANIDDLPWDGNLKRW
SPVRDWQ*
BS22918.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15450-PA | 407 | CG15450-PA | 1..407 | 1..407 | 2215 | 100 | Plus |
| CG3209-PB | 458 | CG3209-PB | 113..442 | 75..407 | 909 | 47.7 | Plus |
| CG3209-PC | 459 | CG3209-PC | 113..443 | 75..407 | 848 | 45.8 | Plus |
| CG3209-PD | 537 | CG3209-PD | 284..521 | 170..407 | 739 | 54.2 | Plus |
| CG3209-PE | 380 | CG3209-PE | 185..364 | 223..407 | 548 | 54.1 | Plus |
| CG3209-PD | 537 | CG3209-PD | 113..273 | 75..237 | 302 | 35.4 | Plus |
