BS22919.complete Sequence
1199 bp assembled on 2011-02-03
GenBank Submission: KX805062
> BS22919.complete
GAAGTTATCAGTCGACATGTCGAATACTTCAGTTCGCCCGATTCCAACGT
TAAAGGGCATCTTTTCGGTGCCGCGCGTCACACAGTCCCGAAACTTCCTC
AAGGAAAACAAGGTGAGCCTGCGCTCGCTGGAAAAGTCCACCAGCCAGAA
GTTGGCCGCTAAGGAGCCGACGCGCCCGAAATGGATGCCCCCGCTGCGAC
GCTCTTCCTCCGTGATGGGAGACTCAAAGGCGGAGAAACCAGCAGCTAAG
GGCAAAACTATAAAACAGAACTCGTTGCAAAATGGCCGCAGCACCTCTCG
CTCACAGCACCAACTGGCCGTGGCCGTTCCGGCGGAGGGGGAACGCTTCG
ATGGCCTGGAGGAGCGCAATCCCATCTTATATGACCCGTCGGAGAACTTA
GAATCCGAGAATCTCCAAGAGCCTTCGTCGGATACAGACATTGATCGCTG
TCAATCGTGTGGCACGAATCGGAGCTCCACCAGCATAGCCATCCAAACTG
AGGACATTACCGACGAACTCTATCTAACAAATGCTCTGAAGAAATGTAAC
TTTGATGCCAGATCTATACTGGAGGAATCCGGTGCAAAATACGGGGAAAA
CTACAAACCCATGCAATATGAAAACGAGGAAGATTTGGAACAGTTGCCGC
TTTCGGCGCGTTCGAACTCCTCGAAGCAGAGTCGCTTCAACATGTCCGAA
ATGGAGGCTATGCCCATGACCGAGGCCGAACCTGCAAACTACGGCGCCTC
AGACGACGAGGCTCCACTCAGTGCCCGTAGTCGTTTCACAACGGCCTCCA
ATGTCACCACCATAAGCTCTAAGTCAAAGCGTCGTGAGCATAAACTAGGA
TCCCGAGATGAGGTGCGCTTGCCGCGTTACCTGGAAAAGCAGAAGCGCGA
GAAGGCGGTGGCCAAGCAGCTTGCGGAATCGCTGGATCCCGACTGTCCGC
GTGGCCATGTGTTGCTCAGCGATCAGGACCGACTGACGCACCTCACTAAT
GCTAAGAAACGCTACGAACAGCTGGTTAATGAACTGAACCACATGCCCAT
GACTGCACAGACGTTGAGGGTGCGCAACCGCAAGGCGGAGATCGACAAGG
AGCTGACCACCGTGGAGGAGGACATCCGCATATACTCCAAGGCAAAGGTC
TTCGTGCTGGCCAGCAAGTCGCGACAGTTGTGAAAGCTTTCTAGACCAT
BS22919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11125-RC | 1167 | CG11125-PC | 1..1167 | 17..1183 | 5820 | 99.9 | Plus |
| CG11125-RA | 1167 | CG11125-PA | 1..1167 | 17..1183 | 5820 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11125-RC | 2177 | CG11125-RC | 180..1348 | 15..1183 | 5830 | 99.9 | Plus |
| CG11125-RA | 1597 | CG11125-RA | 180..1348 | 15..1183 | 5830 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7447787..7448265 | 75..553 | 2335 | 99.2 | Plus |
| 2R | 25286936 | 2R | 7448312..7448619 | 544..851 | 1540 | 100 | Plus |
| 2R | 25286936 | 2R | 7448994..7449166 | 1011..1183 | 865 | 100 | Plus |
| 2R | 25286936 | 2R | 7448783..7448942 | 852..1011 | 800 | 100 | Plus |
| 2R | 25286936 | 2R | 7447652..7447712 | 15..75 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:07:02 has no hits.
BS22919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-03 17:08:46 Download gff for
BS22919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11125-RA | 176..1341 | 17..1182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:18 Download gff for
BS22919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11125-RA | 182..1347 | 17..1182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:44 Download gff for
BS22919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11125-RA | 182..1347 | 17..1182 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:44 Download gff for
BS22919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7447654..7447711 | 17..74 | 100 | -> | Plus |
| 2R | 7447787..7448255 | 75..543 | 99 | -> | Plus |
| 2R | 7448312..7448619 | 544..851 | 100 | -> | Plus |
| 2R | 7448783..7448941 | 852..1010 | 100 | -> | Plus |
| 2R | 7448994..7449165 | 1011..1182 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:18 Download gff for
BS22919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3335159..3335216 | 17..74 | 100 | -> | Plus |
| arm_2R | 3335292..3335760 | 75..543 | 99 | -> | Plus |
| arm_2R | 3335817..3336124 | 544..851 | 100 | -> | Plus |
| arm_2R | 3336288..3336446 | 852..1010 | 100 | -> | Plus |
| arm_2R | 3336499..3336670 | 1011..1182 | 100 | | Plus |
BS22919.pep Sequence
Translation from 16 to 1182
> BS22919.pep
MSNTSVRPIPTLKGIFSVPRVTQSRNFLKENKVSLRSLEKSTSQKLAAKE
PTRPKWMPPLRRSSSVMGDSKAEKPAAKGKTIKQNSLQNGRSTSRSQHQL
AVAVPAEGERFDGLEERNPILYDPSENLESENLQEPSSDTDIDRCQSCGT
NRSSTSIAIQTEDITDELYLTNALKKCNFDARSILEESGAKYGENYKPMQ
YENEEDLEQLPLSARSNSSKQSRFNMSEMEAMPMTEAEPANYGASDDEAP
LSARSRFTTASNVTTISSKSKRREHKLGSRDEVRLPRYLEKQKREKAVAK
QLAESLDPDCPRGHVLLSDQDRLTHLTNAKKRYEQLVNELNHMPMTAQTL
RVRNRKAEIDKELTTVEEDIRIYSKAKVFVLASKSRQL*
BS22919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11125-PC | 388 | CG11125-PC | 1..388 | 1..388 | 1959 | 100 | Plus |
| CG11125-PA | 388 | CG11125-PA | 1..388 | 1..388 | 1959 | 100 | Plus |
| CG32591-PB | 392 | CG32591-PB | 12..383 | 25..375 | 174 | 23.8 | Plus |
| CG32591-PA | 392 | CG32591-PA | 12..383 | 25..375 | 174 | 23.8 | Plus |
