BS22925.complete Sequence
1694 bp assembled on 2011-02-15
GenBank Submission: KX801733
> BS22925.complete
GAAGTTATCAGTCGACATGGGGCACATCGATGGCACAAATAAACTGAAAG
GCTTCGCTCGTCCCGCATTCACCAGCGAACTGGCCTTCAATAGCGTGGTG
CCATGGAGCAATGAGATCCATCGACGCCACGGTGAGGCCATCCATCCGTG
CAACGATGCGATGGACTTCCATGCGTCGGTGTTTAGAAGTCTGGGTGCCG
TGACGCGTGTGTGCATTGGCACATCAACATTTTGGTGTACTTCGTCACTT
TTGCAATTTCATAGCAACTATTTTGATCGCAACATTTGTCCGGTGAATTG
CTTTCGCGAGGGCACCGACCTTATTGCCGTGGGCTTTCGAGCTGCCTACA
CTTGGATGAGACTGCAGGAGCCACTGGATCCATTCATGCAACCAGATAAA
CTAATGACGCTCCTGCACACAGCCGTCCAGCTGGAGATGCCGGCACTGAA
AGCATTGTGCTATGAACAACTGTGCACCGATCGCTTTCGCGAGGAGACCG
CCTTTCAGGTTTACTTGAGGGCTTTGAAATATCCGCAACTCGAGGAGCTG
CGCAAACTGATGCTGCAAAGGATCGGTGCTGCTTTTCTGGCCGTGCTGGG
TGGTGATGATTTTCAGCGAATGCCTCTCGAGGATGTGATTACCATGCTGC
AGCAGGACTCATTGGGTGTCAATTCGGAAATGGAGGTGCTTGTGGCCATT
ATAAGATGGCTGAATTGTCAATCGAAATGCATTGACCAGGCGACGCCACT
ATTGATGGACTGCCTTCGGCTGACACTCTTACCACTGCCAATTTTGAAAA
GATTTTGGCGCTGTGCCATGGCACCACCGGTGCCCGACGAGCCCTTTATG
AACGCTGTTCGTGGCAATATTCACATTCGTGAGAGGATCAGCTGTGCAAT
TACTGTGGTCCAAATGCACCATTTGCATACAAGTCGTCGTGAGTTTCTCG
ACTTCTGTCGCTCCAAGGGCTTGCTGGTCGATATGCCCAGGGAGTGGATA
TACGATGAGCAGTGCCATTATCATTTGCCGCGACCTGGTGGTCCCTACTC
TCATCTTATCTGTGTTCATGTCATTTCGAATTATGCGATACAAAGGGCTC
AGCGTCTAATGGAATCCTCAAAGCGTTGGCCCAGACGTGTTAATACATAC
ATGCCGCCGTCCGATGATCTACAGACCATCAATGAGCTGCCCGAGGACAA
GGATGAGGAGGCGCAGGTGTCAGTAGAGCCATCAGCGCCAGAAATGTCCG
AAGGTCTACCGCAGCCCGAAGAGGATGATTGTTTCATTGCTCGCCTCTTT
CGTGGCACACTATTGCGACTGAACGAAGTGATGGCCGCGCAGGACAGAAA
TATTGAGCGACGCATTGACAATCTTATACGTGATGGTACATTAAGGCCCA
GGTTTATACCCAACGCTATGTCGAGATTTGTATTGCCAACAGCAATGACT
TGTGCTGCACAGGAAGATCTTCAAGAAGATCTCTTTCTCCAAACCGATTT
CTATTCGAGCAACCTGGACGCCATCGATGCGTATTTTTTTCTTCATGTCT
GTCGAATGAGGCAGTTGGTCCAGCCGAAAGTTGTAGTTCCTATCGAGAAA
TCGTCCGAGGAGAGTGTGCGTCCCATGGAGAGCTATGTGCTCGAAACCGA
CCAAATGATCAAAGTCCTAGGCTTTTAAAAGCTTTCTAGACCAT
BS22925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12692-RC | 1662 | CG12692-PC | 1..1662 | 17..1678 | 8310 | 100 | Plus |
| CG12692-RB | 1662 | CG12692-PB | 1..1662 | 17..1678 | 8310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12692-RC | 1946 | CG12692-RC | 88..1750 | 17..1679 | 8315 | 100 | Plus |
| CG12692-RB | 1911 | CG12692-RB | 88..1750 | 17..1679 | 8315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4300313..4301700 | 1679..292 | 6940 | 100 | Minus |
| X | 23542271 | X | 4301795..4302076 | 298..17 | 1395 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:08:24 has no hits.
BS22925.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:53 Download gff for
BS22925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12692-RB | 88..1747 | 17..1676 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:24 Download gff for
BS22925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12692-RB | 88..1747 | 17..1676 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:38:13 Download gff for
BS22925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12692-RB | 88..1747 | 17..1676 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:38:13 Download gff for
BS22925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4300316..4301699 | 293..1676 | 100 | <- | Minus |
| X | 4301801..4302076 | 17..292 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:24 Download gff for
BS22925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4194349..4195732 | 293..1676 | 100 | <- | Minus |
| arm_X | 4195834..4196109 | 17..292 | 100 | | Minus |
BS22925.pep Sequence
Translation from 16 to 1677
> BS22925.pep
MGHIDGTNKLKGFARPAFTSELAFNSVVPWSNEIHRRHGEAIHPCNDAMD
FHASVFRSLGAVTRVCIGTSTFWCTSSLLQFHSNYFDRNICPVNCFREGT
DLIAVGFRAAYTWMRLQEPLDPFMQPDKLMTLLHTAVQLEMPALKALCYE
QLCTDRFREETAFQVYLRALKYPQLEELRKLMLQRIGAAFLAVLGGDDFQ
RMPLEDVITMLQQDSLGVNSEMEVLVAIIRWLNCQSKCIDQATPLLMDCL
RLTLLPLPILKRFWRCAMAPPVPDEPFMNAVRGNIHIRERISCAITVVQM
HHLHTSRREFLDFCRSKGLLVDMPREWIYDEQCHYHLPRPGGPYSHLICV
HVISNYAIQRAQRLMESSKRWPRRVNTYMPPSDDLQTINELPEDKDEEAQ
VSVEPSAPEMSEGLPQPEEDDCFIARLFRGTLLRLNEVMAAQDRNIERRI
DNLIRDGTLRPRFIPNAMSRFVLPTAMTCAAQEDLQEDLFLQTDFYSSNL
DAIDAYFFLHVCRMRQLVQPKVVVPIEKSSEESVRPMESYVLETDQMIKV
LGF*
BS22925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12692-PC | 553 | CG12692-PC | 1..553 | 1..553 | 2932 | 100 | Plus |
| CG12692-PB | 553 | CG12692-PB | 1..553 | 1..553 | 2932 | 100 | Plus |
| CG9970-PA | 484 | CG9970-PA | 146..434 | 60..346 | 325 | 32.4 | Plus |
| CG30357-PA | 451 | CG30357-PA | 173..393 | 107..336 | 212 | 28.8 | Plus |
| CG12857-PA | 440 | CG12857-PA | 95..381 | 44..336 | 206 | 24.7 | Plus |
