BS22946.complete Sequence
436 bp assembled on 2011-02-02
GenBank Submission: KX804378
> BS22946.complete
GAAGTTATCAGTCGACATGTACAATAGTTTATATTTATATCGAAATCTGT
GCAAAATGTCGTTTGTTCCAGAGACTTTTATTATTTATGGCTTTTTATGG
AGCTTGGTGGTTTTCCCAGCTTTCGCTAATTTTTCCCTCTACAACTACGG
GGATTCAGCCTATCCCAATTGCTGTGTTCTCGATATTGACTCAACGCGGA
TACTGCTTAAAATGGGTCAGAAATTTCGCCCAAAATTCCTGCCCTGCACG
ACAATTTTATGCATTGGCGATGGATATGGAATGCTGTTTACGTGTGATAA
AAAGGAACCACCAGAGCACTGTCACTTTAAGGATTATTTGAATGGGGATG
CCAATTATCCAGATTGTTGCTACCGCAAACTTGAGTGCGACTGAAAGCTT
TCTAGACCATTCGTTTGGCGCGCGTTTTTTTTTTAT
BS22946.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34178-RC | 339 | CG34178-PC | 1..339 | 56..394 | 1695 | 100 | Plus |
| CG34178-RB | 339 | CG34178-PB | 1..339 | 56..394 | 1695 | 100 | Plus |
| CG34178-RA | 339 | CG34178-PA | 1..339 | 56..394 | 1695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34178-RC | 492 | CG34178-RC | 14..393 | 17..396 | 1900 | 100 | Plus |
| CG34178-RB | 940 | CG34178-RB | 462..841 | 17..396 | 1900 | 100 | Plus |
| CG34178-RA | 882 | CG34178-RA | 404..783 | 17..396 | 1900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:01:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4434428..4434569 | 17..158 | 710 | 100 | Plus |
| 2L | 23513712 | 2L | 4434616..4434755 | 154..293 | 700 | 100 | Plus |
| 2L | 23513712 | 2L | 4434854..4434958 | 292..396 | 525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:02:00 has no hits.
BS22946.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:02 Download gff for
BS22946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34178-RB | 462..854 | 17..410 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:26 Download gff for
BS22946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34178-RA | 404..796 | 17..410 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:13 Download gff for
BS22946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34178-RA | 404..796 | 17..410 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:13 Download gff for
BS22946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4434428..4434569 | 17..158 | 100 | -> | Plus |
| 2L | 4434621..4434753 | 159..291 | 100 | -> | Plus |
| 2L | 4434854..4434971 | 292..410 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:26 Download gff for
BS22946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4434428..4434569 | 17..158 | 100 | -> | Plus |
| arm_2L | 4434621..4434753 | 159..291 | 100 | -> | Plus |
| arm_2L | 4434854..4434971 | 292..410 | 95 | | Plus |
BS22946.pep Sequence
Translation from 16 to 393
> BS22946.pep
MYNSLYLYRNLCKMSFVPETFIIYGFLWSLVVFPAFANFSLYNYGDSAYP
NCCVLDIDSTRILLKMGQKFRPKFLPCTTILCIGDGYGMLFTCDKKEPPE
HCHFKDYLNGDANYPDCCYRKLECD*
BS22946.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34178-PC | 112 | CG34178-PC | 1..112 | 14..125 | 641 | 100 | Plus |
| CG34178-PB | 112 | CG34178-PB | 1..112 | 14..125 | 641 | 100 | Plus |
| CG34178-PA | 112 | CG34178-PA | 1..112 | 14..125 | 641 | 100 | Plus |
| CG2444-PB | 114 | CG2444-PB | 10..111 | 21..125 | 146 | 32.4 | Plus |
| CG2444-PA | 114 | CG2444-PA | 10..111 | 21..125 | 146 | 32.4 | Plus |
