BS22954.complete Sequence
491 bp assembled on 2011-02-02
GenBank Submission: KX800743
> BS22954.complete
GAAGTTATCAGTCGACATGTTCTCGAGATTAGCCTTACGTCCTTTGACTG
TGGCCACATCTCGTTCGGCTACCACCCATTCCGCCCAAGGACTAAGTAGG
CTCCCTGGGCATGGAAGTCCCGGAAAGGTTCGCCCGGGTTTCCCGTCCGA
CAATTGGGTTAAAGGACCCATGGGCGTCGGCCTGTTGGCATATATCTGTT
CCGGAGACTGTTGCGCCATTAAGCACGAGCACAGCGGCCTATCCTTGGGC
ATCATGGAAGATGGCTACTACAGCAGTGGAATCACCATCGGTATCCTGAC
CACATTTGCTGTGATTAGGCTTCTTCCAGCGATTGTAAAGTGGGCTGATA
GCGAGATTATTAAAATTGAGTCCGAGTACGAAAAGAGTCGTGAAACTAAG
ATCAAGGTCCTATCAATCTCGCCCTCGAACGGAAATAAGGATCCTAGCAA
GGATAATGCCGATCAAAACGTGTAGAAGCTTTCTAGACCAT
BS22954.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17300-RA | 459 | CG17300-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17300-RA | 699 | CG17300-RA | 124..582 | 17..475 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:02:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13086744..13087075 | 361..30 | 1660 | 100 | Minus |
| 3L | 28110227 | 3L | 13086504..13086617 | 475..362 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:02:10 has no hits.
BS22954.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:04 Download gff for
BS22954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 129..582 | 22..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:32 Download gff for
BS22954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 129..582 | 22..475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:18 Download gff for
BS22954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 129..582 | 22..475 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:18 Download gff for
BS22954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13086504..13086617 | 362..475 | 100 | <- | Minus |
| 3L | 13086744..13087081 | 22..361 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:32 Download gff for
BS22954.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13079604..13079717 | 362..475 | 100 | <- | Minus |
| arm_3L | 13079844..13080181 | 22..361 | 98 | | Minus |
BS22954.pep Sequence
Translation from 16 to 474
> BS22954.pep
MFSRLALRPLTVATSRSATTHSAQGLSRLPGHGSPGKVRPGFPSDNWVKG
PMGVGLLAYICSGDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVI
RLLPAIVKWADSEIIKIESEYEKSRETKIKVLSISPSNGNKDPSKDNADQ
NV*
BS22954.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17300-PA | 152 | CG17300-PA | 1..152 | 1..152 | 789 | 100 | Plus |
| ATPsyn-b-PA | 243 | CG8189-PA | 1..137 | 1..133 | 245 | 43.3 | Plus |
