BS22955.complete Sequence
1109 bp assembled on 2011-02-04
GenBank Submission: KX802862
> BS22955.complete
GAAGTTATCAGTCGACATGGCTGCGGCCACCAACAACGATTCCTCCGGCG
TGGAGTCGGCCAAGGAGGAGGTGGAGATGTCGATGCCGCCATCGCCCATG
TCGATGGCCATGGTACTGGCCAAATCGACACCGATGCCCATGCCCACCAG
CGCCTCCAAGGGGATCATGATAACGCCGCCGCCACCGGCAATGCCGCCCA
CGCCCACATCGTCGCCCAACACGCACGGCGAGTGGCCCCACATGAACATC
AACCTCAACCTGAACATGAGTTCAAACCCCAGCACGAATGCATCATTCCA
GCTGAGCAGAGATCGGGGCGAGCACTTTGCCCTGCCGCATCTGCCGCCCC
TGCCGCTGAATCCAAATGCCTCCAATGCCGAGTATCTGCCCAGCCTGATT
CATCCAAGCACCCTGCCCTCGGGTAGCAAAAGCTTCAAGATGCGGCCGCG
AATGCAGCGTCTAAAGCACTCCTACAGCTACAGCAACATAATCGTCCAGT
CAAATGGCCGCAAACTGCGCACCGCCGCCTCCACCTGCAACATCGAGCTG
CTCAACCGCATCCTTGAGGGTGGGGCCAATCCAAATGCCGCCGACGAGTA
CAATCGTAGTCCCCTGCATCTGGCCGCCTGTCGTGGCTACATACCCATTG
TCCAGCAGCTACTAAAGTACGGAGCGAACCCAAATGTAGTCGACTCGCTG
GGGAATACCCCACTCCATCTGGCTGTGATTTCGGCCAGCTCCAATAACTT
CAACGTTGTGGTGGGTGTGCTGCTCCAGGGCGGCGCCAGTGTCCACATGT
ACGATCGCAGCAACAAGTCACCGCTGGAGCTCGCCGAGGCCAAGCTAAGA
TTGCTGCGCAATCGTTACGATCACCCTACGCCGGAGACGGCCAAAATCCT
CGAGGACATGTGCATGCTGACCACGCTCATCTTACGCTACATGGTAAAGC
AGCAGCGCGAGCTGGAGGATCTCTCCGCGCTGGAGAAGCGACTGCAGAAC
CTGAGCACCAGCGATGACCAAGAGCAGGTCGTATCCCAGACCGCCGATGA
GCTGCTCGCCAGTGTCGAGCGGCTATCAATCAACAACAAGTAGAAGCTTT
CTAGACCAT
BS22955.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:12:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10809-RB | 1077 | CG10809-PB | 1..1077 | 17..1093 | 5385 | 100 | Plus |
| CG10809-RA | 1077 | CG10809-PA | 1..1077 | 17..1093 | 5385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10809-RB | 2233 | CG10809-RB | 401..1478 | 17..1094 | 5390 | 100 | Plus |
| CG10809-RA | 1966 | CG10809-RA | 339..1416 | 17..1094 | 5390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9858412..9859489 | 1094..17 | 5390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:12:16 has no hits.
BS22955.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:44 Download gff for
BS22955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RB | 401..1477 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:55 Download gff for
BS22955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RA | 339..1415 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:20:43 Download gff for
BS22955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RA | 339..1415 | 17..1093 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:20:43 Download gff for
BS22955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9858413..9859489 | 17..1093 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:55 Download gff for
BS22955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9851513..9852589 | 17..1093 | 100 | | Minus |
BS22955.pep Sequence
Translation from 16 to 1092
> BS22955.pep
MAAATNNDSSGVESAKEEVEMSMPPSPMSMAMVLAKSTPMPMPTSASKGI
MITPPPPAMPPTPTSSPNTHGEWPHMNINLNLNMSSNPSTNASFQLSRDR
GEHFALPHLPPLPLNPNASNAEYLPSLIHPSTLPSGSKSFKMRPRMQRLK
HSYSYSNIIVQSNGRKLRTAASTCNIELLNRILEGGANPNAADEYNRSPL
HLAACRGYIPIVQQLLKYGANPNVVDSLGNTPLHLAVISASSNNFNVVVG
VLLQGGASVHMYDRSNKSPLELAEAKLRLLRNRYDHPTPETAKILEDMCM
LTTLILRYMVKQQRELEDLSALEKRLQNLSTSDDQEQVVSQTADELLASV
ERLSINNK*
BS22955.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10809-PB | 358 | CG10809-PB | 1..358 | 1..358 | 1838 | 100 | Plus |
| CG10809-PA | 358 | CG10809-PA | 1..358 | 1..358 | 1838 | 100 | Plus |
| Ank-PE | 1549 | CG1651-PE | 493..603 | 159..273 | 162 | 38.3 | Plus |
| Ank-PD | 1549 | CG1651-PD | 493..603 | 159..273 | 162 | 38.3 | Plus |
| Ank-PC | 1549 | CG1651-PC | 493..603 | 159..273 | 162 | 38.3 | Plus |
