BS22962.complete Sequence
620 bp assembled on 2011-02-02
GenBank Submission: KX803195
> BS22962.complete
GAAGTTATCAGTCGACATGGGTAAAAAGGGCAAAGGAAAGAAGGGCAAGA
AGCCCGCCGCAGTTGTGGCTCCCATCGAAGCGCCACCATGTCCTCCGTGT
CCGGAACCACCAAAGCAGATGCAACCACTTGACGCTTGTCCAGAGTCTAG
CGGACCCCACGATGTCCTTCGGGCTCAACCGAATCATTACCCGGCTCTTC
TTCGTATTCCGGAAACAATGGCGGTGGTGGGCTCTGAGAATGGATGCTAC
GATAGCATTTGCAAGCTCCTGAGAGCCGGATTCCGGTGTGCCGAGCGGGT
TTTCGTGATGGCCCCTTGGGGCAACTACGTGGTTTTCCGGTATCACAACA
ATAATGACTTTATTTACTTCCTGTTTGATGGATGCACCTGCGATGTTAAT
AGGTTCCGCTATCTAGACCTCAGCTGCGGAACTGCTGGATTTCTTTTCTT
CGATAATATGCACGACGTTATTAGTTATATTATCCAGTCTCGAAAGACGC
GTCTATATCTGGAGAATCTAAACAAGATTGCCATTGATCAGATTGTGGAG
GAGTATGGCGCTGTAACGTACACCCAAAAGGCAAAATGCATGCGATTCGC
TTAAAAGCTTTCTAGACCAT
BS22962.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12470-RA | 588 | CG12470-PA | 1..588 | 17..604 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12470-RA | 1055 | CG12470-RA | 327..916 | 16..605 | 2950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:02:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 308207..308796 | 16..605 | 2950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:02:19 has no hits.
BS22962.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:04 Download gff for
BS22962.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12470-RA | 328..913 | 17..602 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:38 Download gff for
BS22962.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12470-RA | 328..913 | 17..602 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:23 Download gff for
BS22962.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12470-RA | 328..913 | 17..602 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:23 Download gff for
BS22962.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 308208..308793 | 17..602 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:38 Download gff for
BS22962.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 202241..202826 | 17..602 | 100 | | Plus |
BS22962.pep Sequence
Translation from 16 to 603
> BS22962.pep
MGKKGKGKKGKKPAAVVAPIEAPPCPPCPEPPKQMQPLDACPESSGPHDV
LRAQPNHYPALLRIPETMAVVGSENGCYDSICKLLRAGFRCAERVFVMAP
WGNYVVFRYHNNNDFIYFLFDGCTCDVNRFRYLDLSCGTAGFLFFDNMHD
VISYIIQSRKTRLYLENLNKIAIDQIVEEYGAVTYTQKAKCMRFA*
BS22962.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12470-PA | 195 | CG12470-PA | 1..195 | 1..195 | 1070 | 100 | Plus |
ms(3)76Cc-PA | 1174 | CG9392-PA | 1018..1151 | 30..162 | 287 | 42.6 | Plus |