BS22963.complete Sequence
1250 bp assembled on 2011-02-04
GenBank Submission: KX806402
> BS22963.complete
GAAGTTATCAGTCGACATGAGCAGAAGGAAATGGGACGCTTCCGAAGAGG
ACAGATTCATCGACATCTGGATCCACAACTTGCATCTGTTTGAGCCTGGC
AAGAAACTGACAGAAACCTATGCGGAACTGGAGCCCTATTTTCGAGATGT
TGGCGTAGAGATCAATGTTCAAGGCATAAAGTCGAAAATGGAATCCCTGA
AGCGGAAGTATTTCAATTTGTTACACTCCGACCAGGAAGACCAAGCTATC
ACCTGGAGGCACTTCGATGCGATGGCTTTGGTGGTGAGAGCATCTGCCAA
CGAGGGGAAGGATTCGGAATGGAAGGACTATACGCAGCCATCAAAGACGC
CTCATAAAACGCGCTCTTCTGTTTATATGAACAATCCCGCACAACGTATC
AAATATGAGACACCATTCAAAACCGTCTTCGTGGATGAAAGTGCTGTGAA
CTATTTTGACGATGAGGAAATGCCCAACGCCAAAAGAGTTAGGAAAAGAT
TCGGCAAAACCAGCAATGTCAGAGTAAAGGCGCGAAGAGTTTGGCAGCCG
GCGGAGGAATGCATATTCGTTGATGTGTGGGAAAAGTTCGCTAGTCACAT
ACAGAGTGATAGGAAAAAAATGGATGTCTACAAGGATATGCATAATGAAC
TGCAGCTGCGTGGTGTTGGCATATTACCGGGCGATATCAAATCCAAAATT
GAATCACTTATGCGCACGTTTAGAGCACAGCGAGATTCGGTGGGAGATAA
GTCCGAGTGGATTCATTATTCGAAGATTTTAAAGATCCAGACTCCTATTG
ATTTCACCAAGCTGGATGTATTTTCCGAGCACAGTAGCAGCTACGAAGAC
GATGCGTCCTGGTTCAAAGAATTGGAGCCGAAACCGGATCCCGATCCTAT
CAGCCATCCACCGAGCTCTAGCGATTCCGTTGTCAATCAGTTTGACAATA
AAACTCAGCCGAGCTCTCCCGCGTGCAGTGAAGACTGTTTTTGGTCTGAT
ACTGAACCTAGCCACTGCAAGGTGTCTATTGAAGTGTTGGACCAAGATGA
ATCGACAAAGCCGTTCGAATCTCCCTCCATTGAAAAGCATAAGGCTGCTG
AAGAATTTAGTCAATTTGTAACAAAAGAGCTAGCCGTCTTGAATGATGAT
TTGCTAATCGAAGCAAAACGCCAAATATACAATATCATATGTGTCTTGCA
GAAGAAACAGAATGAAGTAAATAAAAAAGCATAGAAGCTTTCTAGACCAT
BS22963.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:12:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14252-RA | 1218 | CG14252-PA | 1..1218 | 17..1234 | 6075 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14252-RA | 1301 | CG14252-RA | 47..1264 | 17..1234 | 6075 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26946699..26947211 | 722..1234 | 2565 | 100 | Plus |
| 3R | 32079331 | 3R | 26946330..26946646 | 407..723 | 1570 | 99.7 | Plus |
| 3R | 32079331 | 3R | 26945766..26945964 | 18..216 | 995 | 100 | Plus |
| 3R | 32079331 | 3R | 26946012..26946159 | 210..357 | 710 | 98.6 | Plus |
| 3R | 32079331 | 3R | 26946217..26946270 | 354..407 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:12:51 has no hits.
BS22963.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:45 Download gff for
BS22963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14252-RA | 47..1252 | 17..1222 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:48:12 Download gff for
BS22963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14252-RA | 47..1252 | 17..1222 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:20:57 Download gff for
BS22963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14252-RA | 47..1252 | 17..1222 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:20:57 Download gff for
BS22963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26946019..26946155 | 217..353 | 100 | -> | Plus |
| 3R | 26946217..26946270 | 354..407 | 100 | -> | Plus |
| 3R | 26946331..26946646 | 408..723 | 99 | -> | Plus |
| 3R | 26945764..26945964 | 17..216 | 99 | -> | Plus |
| 3R | 26946701..26947199 | 724..1222 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:12 Download gff for
BS22963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22771486..22771686 | 17..216 | 99 | -> | Plus |
| arm_3R | 22771741..22771877 | 217..353 | 100 | -> | Plus |
| arm_3R | 22771939..22771992 | 354..407 | 100 | -> | Plus |
| arm_3R | 22772053..22772368 | 408..723 | 99 | -> | Plus |
| arm_3R | 22772423..22772921 | 724..1222 | 100 | | Plus |
BS22963.pep Sequence
Translation from 16 to 1233
> BS22963.pep
MSRRKWDASEEDRFIDIWIHNLHLFEPGKKLTETYAELEPYFRDVGVEIN
VQGIKSKMESLKRKYFNLLHSDQEDQAITWRHFDAMALVVRASANEGKDS
EWKDYTQPSKTPHKTRSSVYMNNPAQRIKYETPFKTVFVDESAVNYFDDE
EMPNAKRVRKRFGKTSNVRVKARRVWQPAEECIFVDVWEKFASHIQSDRK
KMDVYKDMHNELQLRGVGILPGDIKSKIESLMRTFRAQRDSVGDKSEWIH
YSKILKIQTPIDFTKLDVFSEHSSSYEDDASWFKELEPKPDPDPISHPPS
SSDSVVNQFDNKTQPSSPACSEDCFWSDTEPSHCKVSIEVLDQDESTKPF
ESPSIEKHKAAEEFSQFVTKELAVLNDDLLIEAKRQIYNIICVLQKKQNE
VNKKA*
BS22963.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14252-PA | 405 | CG14252-PA | 1..405 | 1..405 | 2146 | 100 | Plus |
