BS22975.complete Sequence
1253 bp assembled on 2011-02-15
GenBank Submission: KX803408
> BS22975.complete
GAAGTTATCAGTCGACATGTTCTGCACGGAGAGCTGTGAGCACGGATGCA
ATGCAACCTCGTCGGGCAAGCTGATCGCCAATGGAAACGGTGGCGGCCTG
CAGTCGCAGGGAAATTCACAGCATCAGTTCACCATGTCCTACGCTCCACT
GTCGACCAACGATGTGCCCTCCAAGTCCGAGGTGGAACCACCGCGACTGG
GCATGTGCCTGGTCACCGAGTGTCCAGAGGGTCTGAGCATTGACTGCAAT
GTGCCACTGCCGAATTCTTTCAATTTGGATGAATACAAAAATCACATGAT
CTGCTCGAGCTGTACCCAGTTCAATGGTGGCTTGGACAGATTTGGCCAGC
CAGGTACAGCCGGTCCAAGTGCCAGTCCTAGTGCCAATCCATATCCAACT
CCGATGCCCAATCCCATCCAGGCCTCTCCTTGCAGCTTTCATGGCCAGTG
TTGTTCAGCCGGTGGACCATGCGCTGGATATGATTCGCAGCCAAATCCAT
CAAGATGCTATCGACAGGAATCATCGTTGGCTCAAGGAGCCCCAGCGATG
CCGCAGATCTTTTGCCTGGCACCACCCAGTTCCCATGGTGGCTTAAATCA
GCCCGTTTACTTGTGCAGCCTGATTCCAGTTCCGCCATCGTGGAACCTGG
TGCCGCTGGCCCAACCGCAGCACTTGACGCATCAGCAGCTGCTGACGAAT
CCCGCACAGGACTCGCAGCTGCCGTTGCAGCAATTGGTGCAGTACGACCT
GTCCTTCAATCGCCTGCTGGCCGAATTGCGCAAGGAACGGGAGAGGTCCT
GTTGTGACCTGCAGATCCCCCAGCCTCTGGCTTTCCAGCTGTATGCGCCC
ACGGTTAGGTTTCTTGATCAGCCAGATTCCAGTTCGGCGAAGAGAGAGCC
TCATTGCCCGCCGGCAGCTCCTTGTGCTCCTCCAGCTGCACCACCACAAC
CACCATCCTCGTCATCATCCCCAACAGCCACATCTGCCTCCGCCGCCGGG
CTGCCCAGAGCTCGTTCGGCCAGCCCGAAGCGCAGTCGTTCGTGTCTCCG
GAACAAGGATCTCTGGGACAGTGGCGGATCCGTACCAGGTCCATCCCCCT
GCTCCTCGCCCACCCAACATGCGACCGGAAATGTGTGCATGAAGTGCGGA
AACTGCTGGCATTGTCCGCGCTGCAACTGCTCCAACTGCTTCTGGCATCC
CGGCTTGGTGCGAGCTCCTCCAAGAGATGGTCGCTAGAAGCTTTCTAGAC
CAT
BS22975.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:08:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hale-RA | 1221 | CG7570-PA | 1..1221 | 17..1237 | 6075 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:08:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hale-RA | 1384 | CG7570-RA | 94..1314 | 17..1237 | 6075 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:08:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19984496..19985497 | 1237..236 | 4980 | 99.8 | Minus |
| 3L | 28110227 | 3L | 19985555..19985775 | 237..17 | 1105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:08:53 has no hits.
BS22975.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:53 Download gff for
BS22975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hale-RA | 99..1314 | 22..1237 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:39 Download gff for
BS22975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hale-RA | 99..1314 | 22..1237 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:38:26 Download gff for
BS22975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hale-RA | 99..1314 | 22..1237 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:38:26 Download gff for
BS22975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19984496..19985495 | 238..1237 | 99 | <- | Minus |
| 3L | 19985555..19985770 | 22..237 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:39 Download gff for
BS22975.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19977596..19978595 | 238..1237 | 99 | <- | Minus |
| arm_3L | 19978655..19978870 | 22..237 | 100 | | Minus |
BS22975.pep Sequence
Translation from 16 to 1236
> BS22975.pep
MFCTESCEHGCNATSSGKLIANGNGGGLQSQGNSQHQFTMSYAPLSTNDV
PSKSEVEPPRLGMCLVTECPEGLSIDCNVPLPNSFNLDEYKNHMICSSCT
QFNGGLDRFGQPGTAGPSASPSANPYPTPMPNPIQASPCSFHGQCCSAGG
PCAGYDSQPNPSRCYRQESSLAQGAPAMPQIFCLAPPSSHGGLNQPVYLC
SLIPVPPSWNLVPLAQPQHLTHQQLLTNPAQDSQLPLQQLVQYDLSFNRL
LAELRKERERSCCDLQIPQPLAFQLYAPTVRFLDQPDSSSAKREPHCPPA
APCAPPAAPPQPPSSSSSPTATSASAAGLPRARSASPKRSRSCLRNKDLW
DSGGSVPGPSPCSSPTQHATGNVCMKCGNCWHCPRCNCSNCFWHPGLVRA
PPRDGR*
BS22975.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hale-PA | 406 | CG7570-PA | 1..406 | 1..406 | 2267 | 100 | Plus |
