BS22981.complete Sequence
723 bp assembled on 2011-02-02
GenBank Submission: KX800803
> BS22981.complete
GAAGTTATCAGTCGACATGGCATTATCACGCGCCAAGCCCGACGAACTGC
CCAGGGACGCGGTGGTCATAACAGAGGATCAGGCCCTCAAATACCAATGG
AAGATTATAACTTCCTGGGACAAAATAGGCGAAGTATGGTCGTTGCGCTA
CACGCCCGGAATTCTGAGTGCTTTGGCTGCGGGAACGGGCGCCTACATAA
ATAATCATTATCGCACCAAGCTGCGACTTGGAGGACATGGTCGATTGTCC
ACTTACCTCCCGATTGTCGCCGTTCCCGCCATATTTACCATGCTGGCGCA
CAAGTTCTTTATTCAGCGGCCCATCCTACTAAATCCGCTGGGCGAGTGCC
CGGTGTGCATCCAGATGCGCAGTGCTGCCTTTCAGACAAGTCTGGGCATC
GTATATCCCACAATTCTGGCCCCATTCGCCGCATTTCTGTTCGCAACCCG
CTGCTACACGTACCGTATTCCCTCGATTACGGAAAATCCCAGAGAAGTGT
TTCTGTTGTGGCGGAAATTTACACGCCCCATTGTCCCAGCCTTAGGAACC
TTAATCGGCCTGCAGGCCCTGCTAACCATGTTCCTTACTGGCCAGGAGGA
CAAGCAGAACTTTAAACTTATGTTACGCATGAGGGAGATCGAGCACCAGG
TGGAGGAGGAACACTTGCCACAGCGAATGGACTTTTAAAAGCTTTCTAGA
CCATTCGTTTGGCGCCCTAACGG
BS22981.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:05:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13392-RB | 672 | CG13392-PB | 1..672 | 17..688 | 3360 | 100 | Plus |
| CG13392-RA | 672 | CG13392-PA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13392-RB | 922 | CG13392-RB | 101..772 | 17..688 | 3360 | 100 | Plus |
| CG13392-RA | 754 | CG13392-RA | 17..688 | 17..688 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:05:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8381971..8382523 | 688..136 | 2765 | 100 | Minus |
| 2L | 23513712 | 2L | 8382589..8382707 | 135..17 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:05:53 has no hits.
BS22981.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 09:57:15 Download gff for
BS22981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13392-RA | 17..693 | 17..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:35 Download gff for
BS22981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13392-RA | 17..693 | 17..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:07 Download gff for
BS22981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13392-RA | 17..693 | 17..694 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:07 Download gff for
BS22981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8381966..8382523 | 136..694 | 99 | <- | Minus |
| 2L | 8382589..8382707 | 17..135 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:35 Download gff for
BS22981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8381966..8382523 | 136..694 | 99 | <- | Minus |
| arm_2L | 8382589..8382707 | 17..135 | 100 | | Minus |
BS22981.pep Sequence
Translation from 16 to 687
> BS22981.pep
MALSRAKPDELPRDAVVITEDQALKYQWKIITSWDKIGEVWSLRYTPGIL
SALAAGTGAYINNHYRTKLRLGGHGRLSTYLPIVAVPAIFTMLAHKFFIQ
RPILLNPLGECPVCIQMRSAAFQTSLGIVYPTILAPFAAFLFATRCYTYR
IPSITENPREVFLLWRKFTRPIVPALGTLIGLQALLTMFLTGQEDKQNFK
LMLRMREIEHQVEEEHLPQRMDF*
BS22981.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13392-PB | 223 | CG13392-PB | 1..223 | 1..223 | 1164 | 100 | Plus |
| CG13392-PA | 223 | CG13392-PA | 1..223 | 1..223 | 1164 | 100 | Plus |
