BS22987.complete Sequence
1202 bp assembled on 2011-02-08
GenBank Submission: KX801557
> BS22987.complete
GAAGTTATCAGTCGACATGATTGTGAAAATCAGCTGGCCCAAGAACAACA
TAACAAGCGAATGCTTCCGGCGGTTTGGATCTTTTAAAAGACGCTCAAAA
TCGAAGAAAATGTCAGCATTCATCGAGGAAACAAAAAGCCTGCTGCCGCG
GATCGCCTTCATAGCCTGCGGATGCTTCAGTCCACCCACACCCATGCACC
TTCGGATGTTCGAGATAGCCAAGGACCACTTCGAAATGCAGGGAACCCAC
AGAGTGGTAGGTGGCATCATCTCGCCCACGCACGACTCATATGGCAAAAA
GGGTCTGGCCTCCGCCTTGGACAGATGTGCCATGGTCAAGCTGGCCACCC
AGAGCTCCAATTGGATTCGGTTGTCCGATTGGGAGGTGCACCAGAATCAG
TGGATGCGCACGCAGGCGGTGCTCCAGCACCACCAGAACTATATCAATAA
CCACATAAATTCCGGCGGGGGAGGCGGAGATGACGGGGAGAACACACATC
TACCCGGATGGCTGCCTCGTGGGTTGCACGACAGTCGGGATCCTGTACAT
CTGAAGCTACTGTGCGGTGCCGATCTGCTGGAGTCCTTTGCTGTTCCAGG
CCTATGGGCAGAGGCCGATATTGAGGACATTGTGGCTAACCATGGTTTGG
TAGTTATCACCCGGGCCGGCTCAAACCCAGGAAAATTCATCTTTGACTCC
GACATATTGACCAAGTATCAGAGCAACATTACGCTAATCACCAACTGGGT
GCCTAATGAGGTGAGCTCCACGTTGATTCGGCGGCTCTTAGGACGCGGCC
AGTCGGTCAAGTACCTTCTAGACGATCTGGTGCTGGAGTACATCAAGCGC
CAACGATTGTTTAACTTTAAATCTAAGTATATAACGGATGCGGTGCGTCC
CAACCATTTGCTCTTTAACCACGCCTATACGGACAACAACAAGAACGCGA
ACAGCTACTCTATAGGCGACCAGCTGGAGCAGGACATGGACGAGTCGGAC
ACTCCAAGCCCGCAACTGCAGCATACGCCTACGTCGCGGGTTTTCTGCTG
CGGGGAGGTGCCTTTACGTGGATCCAAGGTGCTGCGATCCGGTCCTGGAC
AAGCGGTGCAGGTCATCACCATGCAGGCAGATGAGAAAGAGGAGAGCCAA
GCAAAGAAGCAGAAGATTTCCCAAGTGCAACTTTAGAAGCTTTCTAGACC
AT
BS22987.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:28:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nmnat-RA | 1170 | CG13645-PA | 1..1170 | 17..1186 | 5850 | 100 | Plus |
| Nmnat-RC | 1077 | CG13645-PC | 1..1077 | 110..1186 | 5385 | 100 | Plus |
| Nmnat-RB | 894 | CG13645-PB | 1..857 | 17..873 | 4285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:28:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nmnat-RA | 1287 | CG13645-RA | 22..1191 | 17..1186 | 5850 | 100 | Plus |
| Nmnat-RC | 1214 | CG13645-RC | 1..1118 | 69..1186 | 5590 | 100 | Plus |
| Nmnat-RB | 1236 | CG13645-RB | 22..878 | 17..873 | 4285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:28:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24945525..24945932 | 212..619 | 2040 | 100 | Plus |
| 3R | 32079331 | 3R | 24946884..24947154 | 874..1144 | 1355 | 100 | Plus |
| 3R | 32079331 | 3R | 24945258..24945453 | 17..212 | 980 | 100 | Plus |
| 3R | 32079331 | 3R | 24946140..24946295 | 718..873 | 780 | 100 | Plus |
| 3R | 32079331 | 3R | 24945984..24946085 | 620..721 | 510 | 100 | Plus |
| 3R | 32079331 | 3R | 24947261..24947304 | 1143..1186 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:28:31 has no hits.
BS22987.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-09 09:50:00 Download gff for
BS22987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmnat-RA | 22..1191 | 17..1186 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:59:21 Download gff for
BS22987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmnat-RA | 22..1191 | 17..1186 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:11 Download gff for
BS22987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmnat-RA | 22..1191 | 17..1186 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:11 Download gff for
BS22987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24946884..24947154 | 874..1144 | 100 | -> | Plus |
| 3R | 24947263..24947304 | 1145..1186 | 100 | | Plus |
| 3R | 24945984..24946085 | 620..721 | 100 | -> | Plus |
| 3R | 24946144..24946295 | 722..873 | 100 | -> | Plus |
| 3R | 24945258..24945453 | 17..212 | 100 | -> | Plus |
| 3R | 24945526..24945932 | 213..619 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:59:21 Download gff for
BS22987.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20770980..20771175 | 17..212 | 100 | -> | Plus |
| arm_3R | 20771248..20771654 | 213..619 | 100 | -> | Plus |
| arm_3R | 20771706..20771807 | 620..721 | 100 | -> | Plus |
| arm_3R | 20771866..20772017 | 722..873 | 100 | -> | Plus |
| arm_3R | 20772606..20772876 | 874..1144 | 100 | -> | Plus |
| arm_3R | 20772985..20773026 | 1145..1186 | 100 | | Plus |
BS22987.pep Sequence
Translation from 16 to 1185
> BS22987.pep
MIVKISWPKNNITSECFRRFGSFKRRSKSKKMSAFIEETKSLLPRIAFIA
CGCFSPPTPMHLRMFEIAKDHFEMQGTHRVVGGIISPTHDSYGKKGLASA
LDRCAMVKLATQSSNWIRLSDWEVHQNQWMRTQAVLQHHQNYINNHINSG
GGGGDDGENTHLPGWLPRGLHDSRDPVHLKLLCGADLLESFAVPGLWAEA
DIEDIVANHGLVVITRAGSNPGKFIFDSDILTKYQSNITLITNWVPNEVS
STLIRRLLGRGQSVKYLLDDLVLEYIKRQRLFNFKSKYITDAVRPNHLLF
NHAYTDNNKNANSYSIGDQLEQDMDESDTPSPQLQHTPTSRVFCCGEVPL
RGSKVLRSGPGQAVQVITMQADEKEESQAKKQKISQVQL*
BS22987.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:02:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nmnat-PA | 389 | CG13645-PA | 1..389 | 1..389 | 2061 | 100 | Plus |
| Nmnat-PC | 358 | CG13645-PC | 1..358 | 32..389 | 1897 | 100 | Plus |
| Nmnat-PB | 297 | CG13645-PB | 1..287 | 1..287 | 1526 | 99.7 | Plus |
