BS22988.complete Sequence
935 bp assembled on 2011-02-07
GenBank Submission: KX801454
> BS22988.complete
GAAGTTATCAGTCGACATGAGGTTTCGGTCGCTGAAGAACATATGGCCAA
AAGAGAAGTTGGAGCAATTCCTATTTTTGTTCATTTTATGTGGCTTGCCC
GCCATATACTATGTTCTAATGGAGATAATTCTGCCGGAGTTGTCGGATTA
TTGGTCACCTGGTTACGTATTTCAGCTGCTGCTGGGACTGTTCCTCTTTT
CGAATGTGATGTCCAACTATGTCATGTGCATCCTGGTGGACCCCAGCATC
GATCCCAAGCTTATGAAGAATCAGTTGGTGCGCGGACAGCACAGTGAGGA
CTGGCACGAGTGCGACAAGTGCGGGATTCTTGCTCCACCCCGGTCACGTC
ACTGCAGGAAGTGTGGCGTCTGTGTCCTGATGCGAGATCATCACTGCTTC
TTTACTGGTTGCTGCATCGGTCATGAGAACTATAGATACTTTTTCTATTT
TCTTATCTACTTCTTTCTAAGCTGCATGATTTCACTAACGTCATCTTCGA
TATTTATTTACGTTCTGCATGGGGGCAGATACCAGCTCTTTATGCTGACA
CATCCCGCACCGAACTCTGCCTATTTTAACTCGCTTATTATCAGGATAAT
CTACTTTAAGTTGCCCGATATATACGAGCTGGTGTTCACTCTGGTATTCG
TCCTGCTGTGGATCGGGGTATGCGTAGCTACCTATGTGGCTTATGATCAG
TGGTCTCGTGGCTATTTTTGCTATGATTTTGAACTTCAAAACATTCCTTT
TGACCGAAAACTGCGCCGAAACTTCAAGACGTTCTTGGGCAGGCGAATGA
AGTGGACCTGGATCTCCGGATTTGTTCCCAGCCAGCTGGACCACGACGGA
TTTGATCTGGATCCCGACAACGAACGTGTGGCAGATTGGTGCTCAGAAAC
AACCATCAAGGATGGCTAAAAGCTTTCTAGACCAT
BS22988.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:12:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18810-RA | 903 | CG18810-PA | 1..903 | 17..919 | 4500 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:12:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18810-RA | 1168 | CG18810-RA | 126..1029 | 17..920 | 4505 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:12:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20649037..20649940 | 17..920 | 4505 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:12:46 has no hits.
BS22988.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 10:59:42 Download gff for
BS22988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18810-RA | 16..916 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:50:33 Download gff for
BS22988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18810-RA | 126..1026 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:26 Download gff for
BS22988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18810-RA | 126..1026 | 17..917 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:26 Download gff for
BS22988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20649037..20649937 | 17..917 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:50:33 Download gff for
BS22988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20649037..20649937 | 17..917 | 99 | | Plus |
BS22988.pep Sequence
Translation from 16 to 918
> BS22988.pep
MRFRSLKNIWPKEKLEQFLFLFILCGLPAIYYVLMEIILPELSDYWSPGY
VFQLLLGLFLFSNVMSNYVMCILVDPSIDPKLMKNQLVRGQHSEDWHECD
KCGILAPPRSRHCRKCGVCVLMRDHHCFFTGCCIGHENYRYFFYFLIYFF
LSCMISLTSSSIFIYVLHGGRYQLFMLTHPAPNSAYFNSLIIRIIYFKLP
DIYELVFTLVFVLLWIGVCVATYVAYDQWSRGYFCYDFELQNIPFDRKLR
RNFKTFLGRRMKWTWISGFVPSQLDHDGFDLDPDNERVADWCSETTIKDG
*
BS22988.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18810-PA | 300 | CG18810-PA | 1..300 | 1..300 | 1664 | 100 | Plus |
| CG4676-PA | 284 | CG4676-PA | 2..275 | 1..283 | 446 | 35.2 | Plus |
| CG10344-PB | 278 | CG10344-PB | 1..268 | 1..279 | 382 | 28.9 | Plus |
| CG10344-PA | 198 | CG10344-PA | 1..166 | 1..172 | 341 | 36.6 | Plus |
| CG13029-PC | 288 | CG13029-PC | 30..276 | 22..278 | 337 | 31.6 | Plus |
